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author | Willem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl> | 2015-03-11 18:44:53 +0100 |
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committer | Willem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl> | 2015-03-11 18:44:53 +0100 |
commit | 6909836555afe155ffc3897ef2189ed0562bb045 (patch) | |
tree | 8e42aff75e2a1b6648952611d6bf7e5f66510e68 | |
parent | 18d12242207d1113c3015b451f522531168e626a (diff) | |
download | astra-6909836555afe155ffc3897ef2189ed0562bb045.tar.gz astra-6909836555afe155ffc3897ef2189ed0562bb045.tar.bz2 astra-6909836555afe155ffc3897ef2189ed0562bb045.tar.xz astra-6909836555afe155ffc3897ef2189ed0562bb045.zip |
Add flexible volgeom3d support to astraCudaBP
-rw-r--r-- | cuda/3d/astra3d.cu | 176 | ||||
-rw-r--r-- | cuda/3d/astra3d.h | 47 | ||||
-rw-r--r-- | src/CudaBackProjectionAlgorithm3D.cpp | 54 |
3 files changed, 24 insertions, 253 deletions
diff --git a/cuda/3d/astra3d.cu b/cuda/3d/astra3d.cu index 2f7ea99..97bebf4 100644 --- a/cuda/3d/astra3d.cu +++ b/cuda/3d/astra3d.cu @@ -1331,173 +1331,30 @@ bool astraCudaPar3DFP(const float* pfVolume, float* pfProjections, } -bool astraCudaConeBP(float* pfVolume, const float* pfProjections, - unsigned int iVolX, - unsigned int iVolY, - unsigned int iVolZ, - unsigned int iProjAngles, - unsigned int iProjU, - unsigned int iProjV, - float fOriginSourceDistance, - float fOriginDetectorDistance, - float fDetUSize, - float fDetVSize, - const float *pfAngles, - int iGPUIndex, int iVoxelSuperSampling) -{ - if (iVolX == 0 || iVolY == 0 || iVolZ == 0) - return false; - if (iProjAngles == 0 || iProjU == 0 || iProjV == 0 || pfAngles == 0) - return false; - - SConeProjection* p = genConeProjections(iProjAngles, - iProjU, iProjV, - fOriginSourceDistance, - fOriginDetectorDistance, - fDetUSize, fDetVSize, - pfAngles); - - bool ok; - ok = astraCudaConeBP(pfVolume, pfProjections, iVolX, iVolY, iVolZ, - iProjAngles, iProjU, iProjV, p, iGPUIndex, iVoxelSuperSampling); - - delete[] p; - - return ok; -} -bool astraCudaConeBP(float* pfVolume, const float* pfProjections, - unsigned int iVolX, - unsigned int iVolY, - unsigned int iVolZ, - unsigned int iProjAngles, - unsigned int iProjU, - unsigned int iProjV, - const SConeProjection *pfAngles, - int iGPUIndex, int iVoxelSuperSampling) +bool astraCudaBP(float* pfVolume, const float* pfProjections, + const CVolumeGeometry3D* pVolGeom, + const CProjectionGeometry3D* pProjGeom, + int iGPUIndex, int iVoxelSuperSampling) { SDimensions3D dims; - dims.iVolX = iVolX; - dims.iVolY = iVolY; - dims.iVolZ = iVolZ; - if (iVolX == 0 || iVolY == 0 || iVolZ == 0) - return false; - - dims.iProjAngles = iProjAngles; - dims.iProjU = iProjU; - dims.iProjV = iProjV; - - if (iProjAngles == 0 || iProjU == 0 || iProjV == 0 || pfAngles == 0) - return false; - - dims.iRaysPerVoxelDim = iVoxelSuperSampling; - - if (iProjAngles == 0 || iProjU == 0 || iProjV == 0 || pfAngles == 0) - return false; - - if (iGPUIndex != -1) { - cudaSetDevice(iGPUIndex); - cudaError_t err = cudaGetLastError(); - - // Ignore errors caused by calling cudaSetDevice multiple times - if (err != cudaSuccess && err != cudaErrorSetOnActiveProcess) - return false; - } - - cudaPitchedPtr D_volumeData = allocateVolumeData(dims); - bool ok = D_volumeData.ptr; + bool ok = convertAstraGeometry_dims(pVolGeom, pProjGeom, dims); if (!ok) return false; - cudaPitchedPtr D_projData = allocateProjectionData(dims); - ok = D_projData.ptr; - if (!ok) { - cudaFree(D_volumeData.ptr); - return false; - } - - ok &= copyProjectionsToDevice(pfProjections, D_projData, - dims, dims.iProjU); - - ok &= zeroVolumeData(D_volumeData, dims); - - if (!ok) { - cudaFree(D_volumeData.ptr); - cudaFree(D_projData.ptr); - return false; - } - - ok &= ConeBP(D_volumeData, D_projData, dims, pfAngles); - - ok &= copyVolumeFromDevice(pfVolume, D_volumeData, dims, dims.iVolX); - - - cudaFree(D_volumeData.ptr); - cudaFree(D_projData.ptr); - - return ok; - -} - -bool astraCudaPar3DBP(float* pfVolume, const float* pfProjections, - unsigned int iVolX, - unsigned int iVolY, - unsigned int iVolZ, - unsigned int iProjAngles, - unsigned int iProjU, - unsigned int iProjV, - float fDetUSize, - float fDetVSize, - const float *pfAngles, - int iGPUIndex, int iVoxelSuperSampling) -{ - if (iVolX == 0 || iVolY == 0 || iVolZ == 0) - return false; - if (iProjAngles == 0 || iProjU == 0 || iProjV == 0 || pfAngles == 0) - return false; - - SPar3DProjection* p = genPar3DProjections(iProjAngles, - iProjU, iProjV, - fDetUSize, fDetVSize, - pfAngles); - - bool ok; - ok = astraCudaPar3DBP(pfVolume, pfProjections, iVolX, iVolY, iVolZ, - iProjAngles, iProjU, iProjV, p, iGPUIndex, iVoxelSuperSampling); - - delete[] p; - - return ok; -} - - -bool astraCudaPar3DBP(float* pfVolume, const float* pfProjections, - unsigned int iVolX, - unsigned int iVolY, - unsigned int iVolZ, - unsigned int iProjAngles, - unsigned int iProjU, - unsigned int iProjV, - const SPar3DProjection *pfAngles, - int iGPUIndex, int iVoxelSuperSampling) -{ - SDimensions3D dims; + dims.iRaysPerVoxelDim = iVoxelSuperSampling; - dims.iVolX = iVolX; - dims.iVolY = iVolY; - dims.iVolZ = iVolZ; - if (iVolX == 0 || iVolY == 0 || iVolZ == 0) - return false; + SPar3DProjection* pParProjs; + SConeProjection* pConeProjs; - dims.iProjAngles = iProjAngles; - dims.iProjU = iProjU; - dims.iProjV = iProjV; + float outputScale; - if (iProjAngles == 0 || iProjU == 0 || iProjV == 0 || pfAngles == 0) - return false; + ok = convertAstraGeometry(pVolGeom, pProjGeom, + pParProjs, pConeProjs, + outputScale); - dims.iRaysPerVoxelDim = iVoxelSuperSampling; + // TODO: OutputScale if (iGPUIndex != -1) { cudaSetDevice(iGPUIndex); @@ -1510,7 +1367,7 @@ bool astraCudaPar3DBP(float* pfVolume, const float* pfProjections, cudaPitchedPtr D_volumeData = allocateVolumeData(dims); - bool ok = D_volumeData.ptr; + ok = D_volumeData.ptr; if (!ok) return false; @@ -1532,7 +1389,10 @@ bool astraCudaPar3DBP(float* pfVolume, const float* pfProjections, return false; } - ok &= Par3DBP(D_volumeData, D_projData, dims, pfAngles); + if (pParProjs) + ok &= Par3DBP(D_volumeData, D_projData, dims, pParProjs); + else + ok &= ConeBP(D_volumeData, D_projData, dims, pConeProjs); ok &= copyVolumeFromDevice(pfVolume, D_volumeData, dims, dims.iVolX); diff --git a/cuda/3d/astra3d.h b/cuda/3d/astra3d.h index b2e4e08..5464d2f 100644 --- a/cuda/3d/astra3d.h +++ b/cuda/3d/astra3d.h @@ -332,50 +332,9 @@ _AstraExport bool astraCudaPar3DFP(const float* pfVolume, float* pfProjections, Cuda3DProjectionKernel projKernel); -_AstraExport bool astraCudaConeBP(float* pfVolume, const float* pfProjections, - unsigned int iVolX, - unsigned int iVolY, - unsigned int iVolZ, - unsigned int iProjAngles, - unsigned int iProjU, - unsigned int iProjV, - float fOriginSourceDistance, - float fOriginDetectorDistance, - float fDetUSize, - float fDetVSize, - const float *pfAngles, - int iGPUIndex, int iVoxelSuperSampling); - -_AstraExport bool astraCudaConeBP(float* pfVolume, const float* pfProjections, - unsigned int iVolX, - unsigned int iVolY, - unsigned int iVolZ, - unsigned int iProjAngles, - unsigned int iProjU, - unsigned int iProjV, - const SConeProjection *pfAngles, - int iGPUIndex, int iVoxelSuperSampling); - -_AstraExport bool astraCudaPar3DBP(float* pfVolume, const float* pfProjections, - unsigned int iVolX, - unsigned int iVolY, - unsigned int iVolZ, - unsigned int iProjAngles, - unsigned int iProjU, - unsigned int iProjV, - float fDetUSize, - float fDetVSize, - const float *pfAngles, - int iGPUIndex, int iVoxelSuperSampling); - -_AstraExport bool astraCudaPar3DBP(float* pfVolume, const float* pfProjections, - unsigned int iVolX, - unsigned int iVolY, - unsigned int iVolZ, - unsigned int iProjAngles, - unsigned int iProjU, - unsigned int iProjV, - const SPar3DProjection *pfAngles, +_AstraExport bool astraCudaBP(float* pfVolume, const float* pfProjections, + const CVolumeGeometry3D* pVolGeom, + const CProjectionGeometry3D* pProjGeom, int iGPUIndex, int iVoxelSuperSampling); _AstraExport bool astraCudaBP_SIRTWeighted(float* pfVolume, const float* pfProjections, diff --git a/src/CudaBackProjectionAlgorithm3D.cpp b/src/CudaBackProjectionAlgorithm3D.cpp index 7117cfc..a8a1b0a 100644 --- a/src/CudaBackProjectionAlgorithm3D.cpp +++ b/src/CudaBackProjectionAlgorithm3D.cpp @@ -164,10 +164,6 @@ void CCudaBackProjectionAlgorithm3D::run(int _iNrIterations) ASTRA_ASSERT(pReconMem); const CProjectionGeometry3D* projgeom = pSinoMem->getGeometry(); - const CConeProjectionGeometry3D* conegeom = dynamic_cast<const CConeProjectionGeometry3D*>(projgeom); - const CParallelProjectionGeometry3D* par3dgeom = dynamic_cast<const CParallelProjectionGeometry3D*>(projgeom); - const CConeVecProjectionGeometry3D* conevecgeom = dynamic_cast<const CConeVecProjectionGeometry3D*>(projgeom); - const CParallelVecProjectionGeometry3D* parvec3dgeom = dynamic_cast<const CParallelVecProjectionGeometry3D*>(projgeom); const CVolumeGeometry3D& volgeom = *pReconMem->getGeometry(); if (m_bSIRTWeighting) { @@ -175,54 +171,10 @@ void CCudaBackProjectionAlgorithm3D::run(int _iNrIterations) pSinoMem->getDataConst(), &volgeom, projgeom, m_iGPUIndex, m_iVoxelSuperSampling); - } else if (conegeom) { - astraCudaConeBP(pReconMem->getData(), pSinoMem->getDataConst(), - volgeom.getGridColCount(), - volgeom.getGridRowCount(), - volgeom.getGridSliceCount(), - conegeom->getProjectionCount(), - conegeom->getDetectorColCount(), - conegeom->getDetectorRowCount(), - conegeom->getOriginSourceDistance(), - conegeom->getOriginDetectorDistance(), - conegeom->getDetectorSpacingX(), - conegeom->getDetectorSpacingY(), - conegeom->getProjectionAngles(), - m_iGPUIndex, m_iVoxelSuperSampling); - } else if (par3dgeom) { - astraCudaPar3DBP(pReconMem->getData(), pSinoMem->getDataConst(), - volgeom.getGridColCount(), - volgeom.getGridRowCount(), - volgeom.getGridSliceCount(), - par3dgeom->getProjectionCount(), - par3dgeom->getDetectorColCount(), - par3dgeom->getDetectorRowCount(), - par3dgeom->getDetectorSpacingX(), - par3dgeom->getDetectorSpacingY(), - par3dgeom->getProjectionAngles(), - m_iGPUIndex, m_iVoxelSuperSampling); - } else if (parvec3dgeom) { - astraCudaPar3DBP(pReconMem->getData(), pSinoMem->getDataConst(), - volgeom.getGridColCount(), - volgeom.getGridRowCount(), - volgeom.getGridSliceCount(), - parvec3dgeom->getProjectionCount(), - parvec3dgeom->getDetectorColCount(), - parvec3dgeom->getDetectorRowCount(), - parvec3dgeom->getProjectionVectors(), - m_iGPUIndex, m_iVoxelSuperSampling); - } else if (conevecgeom) { - astraCudaConeBP(pReconMem->getData(), pSinoMem->getDataConst(), - volgeom.getGridColCount(), - volgeom.getGridRowCount(), - volgeom.getGridSliceCount(), - conevecgeom->getProjectionCount(), - conevecgeom->getDetectorColCount(), - conevecgeom->getDetectorRowCount(), - conevecgeom->getProjectionVectors(), - m_iGPUIndex, m_iVoxelSuperSampling); } else { - ASTRA_ASSERT(false); + astraCudaBP(pReconMem->getData(), pSinoMem->getDataConst(), + &volgeom, projgeom, + m_iGPUIndex, m_iVoxelSuperSampling); } } |