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-rw-r--r--cuda/3d/algo3d.cu15
-rw-r--r--cuda/3d/algo3d.h6
-rw-r--r--cuda/3d/astra3d.cu48
-rw-r--r--cuda/3d/cgls3d.cu2
-rw-r--r--cuda/3d/sirt3d.cu2
5 files changed, 36 insertions, 37 deletions
diff --git a/cuda/3d/algo3d.cu b/cuda/3d/algo3d.cu
index b775438..cc86b70 100644
--- a/cuda/3d/algo3d.cu
+++ b/cuda/3d/algo3d.cu
@@ -41,6 +41,7 @@ ReconAlgo3D::ReconAlgo3D()
coneProjs = 0;
par3DProjs = 0;
shouldAbort = false;
+ fOutputScale = 1.0f;
}
ReconAlgo3D::~ReconAlgo3D()
@@ -57,9 +58,10 @@ void ReconAlgo3D::reset()
shouldAbort = false;
}
-bool ReconAlgo3D::setConeGeometry(const SDimensions3D& _dims, const SConeProjection* _angles)
+bool ReconAlgo3D::setConeGeometry(const SDimensions3D& _dims, const SConeProjection* _angles, float _outputScale)
{
dims = _dims;
+ fOutputScale = _outputScale;
coneProjs = new SConeProjection[dims.iProjAngles];
par3DProjs = 0;
@@ -69,9 +71,10 @@ bool ReconAlgo3D::setConeGeometry(const SDimensions3D& _dims, const SConeProject
return true;
}
-bool ReconAlgo3D::setPar3DGeometry(const SDimensions3D& _dims, const SPar3DProjection* _angles)
+bool ReconAlgo3D::setPar3DGeometry(const SDimensions3D& _dims, const SPar3DProjection* _angles, float _outputScale)
{
dims = _dims;
+ fOutputScale = _outputScale;
par3DProjs = new SPar3DProjection[dims.iProjAngles];
coneProjs = 0;
@@ -87,9 +90,9 @@ bool ReconAlgo3D::callFP(cudaPitchedPtr& D_volumeData,
float outputScale)
{
if (coneProjs) {
- return ConeFP(D_volumeData, D_projData, dims, coneProjs, outputScale);
+ return ConeFP(D_volumeData, D_projData, dims, coneProjs, outputScale * this->fOutputScale);
} else {
- return Par3DFP(D_volumeData, D_projData, dims, par3DProjs, outputScale);
+ return Par3DFP(D_volumeData, D_projData, dims, par3DProjs, outputScale * this->fOutputScale);
}
}
@@ -98,9 +101,9 @@ bool ReconAlgo3D::callBP(cudaPitchedPtr& D_volumeData,
float outputScale)
{
if (coneProjs) {
- return ConeBP(D_volumeData, D_projData, dims, coneProjs, outputScale);
+ return ConeBP(D_volumeData, D_projData, dims, coneProjs, outputScale * this->fOutputScale);
} else {
- return Par3DBP(D_volumeData, D_projData, dims, par3DProjs, outputScale);
+ return Par3DBP(D_volumeData, D_projData, dims, par3DProjs, outputScale * this->fOutputScale);
}
}
diff --git a/cuda/3d/algo3d.h b/cuda/3d/algo3d.h
index 35ffc49..886b092 100644
--- a/cuda/3d/algo3d.h
+++ b/cuda/3d/algo3d.h
@@ -39,8 +39,8 @@ public:
ReconAlgo3D();
~ReconAlgo3D();
- bool setConeGeometry(const SDimensions3D& dims, const SConeProjection* projs);
- bool setPar3DGeometry(const SDimensions3D& dims, const SPar3DProjection* projs);
+ bool setConeGeometry(const SDimensions3D& dims, const SConeProjection* projs, float fOutputScale);
+ bool setPar3DGeometry(const SDimensions3D& dims, const SPar3DProjection* projs, float fOutputScale);
void signalAbort() { shouldAbort = true; }
@@ -58,6 +58,8 @@ protected:
SConeProjection* coneProjs;
SPar3DProjection* par3DProjs;
+ float fOutputScale;
+
volatile bool shouldAbort;
};
diff --git a/cuda/3d/astra3d.cu b/cuda/3d/astra3d.cu
index 7589416..ae79efb 100644
--- a/cuda/3d/astra3d.cu
+++ b/cuda/3d/astra3d.cu
@@ -353,7 +353,7 @@ public:
SConeProjection* projs;
SPar3DProjection* parprojs;
- float fPixelSize;
+ float fOutputScale;
bool initialized;
bool setStartReconstruction;
@@ -390,6 +390,8 @@ AstraSIRT3d::AstraSIRT3d()
pData->dims.iRaysPerVoxelDim = 1;
pData->projs = 0;
+ pData->parprojs = 0;
+ pData->fOutputScale = 1.0f;
pData->initialized = false;
pData->setStartReconstruction = false;
@@ -435,11 +437,10 @@ bool AstraSIRT3d::setGeometry(const CVolumeGeometry3D* pVolGeom,
pData->projs = 0;
pData->parprojs = 0;
- float outputScale;
ok = convertAstraGeometry(pVolGeom, pProjGeom,
pData->parprojs, pData->projs,
- outputScale);
+ pData->fOutputScale);
if (!ok)
return false;
@@ -451,8 +452,6 @@ bool AstraSIRT3d::setGeometry(const CVolumeGeometry3D* pVolGeom,
pData->projType = PROJ_PARALLEL;
}
- // TODO: Handle outputScale
-
return true;
}
@@ -519,9 +518,9 @@ bool AstraSIRT3d::init()
bool ok;
if (pData->projType == PROJ_PARALLEL) {
- ok = pData->sirt.setPar3DGeometry(pData->dims, pData->parprojs);
+ ok = pData->sirt.setPar3DGeometry(pData->dims, pData->parprojs, pData->fOutputScale);
} else {
- ok = pData->sirt.setConeGeometry(pData->dims, pData->projs);
+ ok = pData->sirt.setConeGeometry(pData->dims, pData->projs, pData->fOutputScale);
}
if (!ok)
@@ -733,7 +732,7 @@ public:
SConeProjection* projs;
SPar3DProjection* parprojs;
- float fPixelSize;
+ float fOutputScale;
bool initialized;
bool setStartReconstruction;
@@ -770,6 +769,8 @@ AstraCGLS3d::AstraCGLS3d()
pData->dims.iRaysPerVoxelDim = 1;
pData->projs = 0;
+ pData->parprojs = 0;
+ pData->fOutputScale = 1.0f;
pData->initialized = false;
pData->setStartReconstruction = false;
@@ -815,11 +816,10 @@ bool AstraCGLS3d::setGeometry(const CVolumeGeometry3D* pVolGeom,
pData->projs = 0;
pData->parprojs = 0;
- float outputScale;
ok = convertAstraGeometry(pVolGeom, pProjGeom,
pData->parprojs, pData->projs,
- outputScale);
+ pData->fOutputScale);
if (!ok)
return false;
@@ -831,8 +831,6 @@ bool AstraCGLS3d::setGeometry(const CVolumeGeometry3D* pVolGeom,
pData->projType = PROJ_PARALLEL;
}
- // TODO: Handle outputScale
-
return true;
}
@@ -900,9 +898,9 @@ bool AstraCGLS3d::init()
bool ok;
if (pData->projType == PROJ_PARALLEL) {
- ok = pData->cgls.setPar3DGeometry(pData->dims, pData->parprojs);
+ ok = pData->cgls.setPar3DGeometry(pData->dims, pData->parprojs, pData->fOutputScale);
} else {
- ok = pData->cgls.setConeGeometry(pData->dims, pData->projs);
+ ok = pData->cgls.setConeGeometry(pData->dims, pData->projs, pData->fOutputScale);
}
if (!ok)
@@ -1164,10 +1162,10 @@ bool astraCudaFP(const float* pfVolume, float* pfProjections,
if (pParProjs) {
switch (projKernel) {
case ker3d_default:
- ok &= Par3DFP(D_volumeData, D_projData, dims, pParProjs, 1.0f);
+ ok &= Par3DFP(D_volumeData, D_projData, dims, pParProjs, outputScale);
break;
case ker3d_sum_square_weights:
- ok &= Par3DFP_SumSqW(D_volumeData, D_projData, dims, pParProjs, 1.0f);
+ ok &= Par3DFP_SumSqW(D_volumeData, D_projData, dims, pParProjs, outputScale*outputScale);
break;
default:
assert(false);
@@ -1175,7 +1173,7 @@ bool astraCudaFP(const float* pfVolume, float* pfProjections,
} else {
switch (projKernel) {
case ker3d_default:
- ok &= ConeFP(D_volumeData, D_projData, dims, pConeProjs, 1.0f);
+ ok &= ConeFP(D_volumeData, D_projData, dims, pConeProjs, outputScale);
break;
default:
assert(false);
@@ -1216,8 +1214,6 @@ bool astraCudaBP(float* pfVolume, const float* pfProjections,
pParProjs, pConeProjs,
outputScale);
- // TODO: OutputScale
-
if (iGPUIndex != -1) {
cudaSetDevice(iGPUIndex);
cudaError_t err = cudaGetLastError();
@@ -1252,9 +1248,9 @@ bool astraCudaBP(float* pfVolume, const float* pfProjections,
}
if (pParProjs)
- ok &= Par3DBP(D_volumeData, D_projData, dims, pParProjs, 1.0f);
+ ok &= Par3DBP(D_volumeData, D_projData, dims, pParProjs, outputScale);
else
- ok &= ConeBP(D_volumeData, D_projData, dims, pConeProjs, 1.0f);
+ ok &= ConeBP(D_volumeData, D_projData, dims, pConeProjs, outputScale);
ok &= copyVolumeFromDevice(pfVolume, D_volumeData, dims, dims.iVolX);
@@ -1293,8 +1289,6 @@ bool astraCudaBP_SIRTWeighted(float* pfVolume,
pParProjs, pConeProjs,
outputScale);
- // TODO: OutputScale
-
if (iGPUIndex != -1) {
cudaSetDevice(iGPUIndex);
cudaError_t err = cudaGetLastError();
@@ -1330,9 +1324,9 @@ bool astraCudaBP_SIRTWeighted(float* pfVolume,
processSino3D<opSet>(D_projData, 1.0f, dims);
if (pParProjs)
- ok &= Par3DBP(D_pixelWeight, D_projData, dims, pParProjs, 1.0f);
+ ok &= Par3DBP(D_pixelWeight, D_projData, dims, pParProjs, outputScale);
else
- ok &= ConeBP(D_pixelWeight, D_projData, dims, pConeProjs, 1.0f);
+ ok &= ConeBP(D_pixelWeight, D_projData, dims, pConeProjs, outputScale);
processVol3D<opInvert>(D_pixelWeight, dims);
if (!ok) {
@@ -1347,9 +1341,9 @@ bool astraCudaBP_SIRTWeighted(float* pfVolume,
ok &= zeroVolumeData(D_volumeData, dims);
// Do BP into D_volumeData
if (pParProjs)
- ok &= Par3DBP(D_volumeData, D_projData, dims, pParProjs, 1.0f);
+ ok &= Par3DBP(D_volumeData, D_projData, dims, pParProjs, outputScale);
else
- ok &= ConeBP(D_volumeData, D_projData, dims, pConeProjs, 1.0f);
+ ok &= ConeBP(D_volumeData, D_projData, dims, pConeProjs, outputScale);
// Multiply with weights
processVol3D<opMul>(D_volumeData, D_pixelWeight, dims);
diff --git a/cuda/3d/cgls3d.cu b/cuda/3d/cgls3d.cu
index 4f632f3..dd0e8a0 100644
--- a/cuda/3d/cgls3d.cu
+++ b/cuda/3d/cgls3d.cu
@@ -242,7 +242,7 @@ bool doCGLS(cudaPitchedPtr& D_volumeData,
CGLS cgls;
bool ok = true;
- ok &= cgls.setConeGeometry(dims, angles);
+ ok &= cgls.setConeGeometry(dims, angles, 1.0f);
if (D_maskData.ptr)
ok &= cgls.enableVolumeMask();
diff --git a/cuda/3d/sirt3d.cu b/cuda/3d/sirt3d.cu
index 0e6630a..484521e 100644
--- a/cuda/3d/sirt3d.cu
+++ b/cuda/3d/sirt3d.cu
@@ -347,7 +347,7 @@ bool doSIRT(cudaPitchedPtr& D_volumeData,
SIRT sirt;
bool ok = true;
- ok &= sirt.setConeGeometry(dims, angles);
+ ok &= sirt.setConeGeometry(dims, angles, 1.0f);
if (D_maskData.ptr)
ok &= sirt.enableVolumeMask();
generated by cgit v1.2.3 (git 2.25.1) at 2024-09-20 15:49:17 +0000