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-rw-r--r--cuda/2d/sirt.cu72
1 files changed, 36 insertions, 36 deletions
diff --git a/cuda/2d/sirt.cu b/cuda/2d/sirt.cu
index 31954e4..eb65962 100644
--- a/cuda/2d/sirt.cu
+++ b/cuda/2d/sirt.cu
@@ -88,17 +88,17 @@ void SIRT::reset()
bool SIRT::init()
{
- allocateVolume(D_pixelWeight, dims.iVolWidth+2, dims.iVolHeight+2, pixelPitch);
- zeroVolume(D_pixelWeight, pixelPitch, dims.iVolWidth+2, dims.iVolHeight+2);
+ allocateVolume(D_pixelWeight, dims.iVolWidth, dims.iVolHeight, pixelPitch);
+ zeroVolume(D_pixelWeight, pixelPitch, dims.iVolWidth, dims.iVolHeight);
- allocateVolume(D_tmpData, dims.iVolWidth+2, dims.iVolHeight+2, tmpPitch);
- zeroVolume(D_tmpData, tmpPitch, dims.iVolWidth+2, dims.iVolHeight+2);
+ allocateVolume(D_tmpData, dims.iVolWidth, dims.iVolHeight, tmpPitch);
+ zeroVolume(D_tmpData, tmpPitch, dims.iVolWidth, dims.iVolHeight);
- allocateVolume(D_projData, dims.iProjDets+2, dims.iProjAngles, projPitch);
- zeroVolume(D_projData, projPitch, dims.iProjDets+2, dims.iProjAngles);
+ allocateVolume(D_projData, dims.iProjDets, dims.iProjAngles, projPitch);
+ zeroVolume(D_projData, projPitch, dims.iProjDets, dims.iProjAngles);
- allocateVolume(D_lineWeight, dims.iProjDets+2, dims.iProjAngles, linePitch);
- zeroVolume(D_lineWeight, linePitch, dims.iProjDets+2, dims.iProjAngles);
+ allocateVolume(D_lineWeight, dims.iProjDets, dims.iProjAngles, linePitch);
+ zeroVolume(D_lineWeight, linePitch, dims.iProjDets, dims.iProjAngles);
// We can't precompute lineWeights and pixelWeights when using a mask
if (!useVolumeMask && !useSinogramMask)
@@ -110,33 +110,33 @@ bool SIRT::init()
bool SIRT::precomputeWeights()
{
- zeroVolume(D_lineWeight, linePitch, dims.iProjDets+2, dims.iProjAngles);
+ zeroVolume(D_lineWeight, linePitch, dims.iProjDets, dims.iProjAngles);
if (useVolumeMask) {
callFP(D_maskData, maskPitch, D_lineWeight, linePitch, 1.0f);
} else {
- processVol<opSet, VOL>(D_tmpData, 1.0f, tmpPitch, dims.iVolWidth, dims.iVolHeight);
+ processVol<opSet>(D_tmpData, 1.0f, tmpPitch, dims.iVolWidth, dims.iVolHeight);
callFP(D_tmpData, tmpPitch, D_lineWeight, linePitch, 1.0f);
}
- processVol<opInvert, SINO>(D_lineWeight, linePitch, dims.iProjDets, dims.iProjAngles);
+ processVol<opInvert>(D_lineWeight, linePitch, dims.iProjDets, dims.iProjAngles);
if (useSinogramMask) {
// scale line weights with sinogram mask to zero out masked sinogram pixels
- processVol<opMul, SINO>(D_lineWeight, D_smaskData, linePitch, dims.iProjDets, dims.iProjAngles);
+ processVol<opMul>(D_lineWeight, D_smaskData, linePitch, dims.iProjDets, dims.iProjAngles);
}
- zeroVolume(D_pixelWeight, pixelPitch, dims.iVolWidth+2, dims.iVolHeight+2);
+ zeroVolume(D_pixelWeight, pixelPitch, dims.iVolWidth, dims.iVolHeight);
if (useSinogramMask) {
callBP(D_pixelWeight, pixelPitch, D_smaskData, smaskPitch);
} else {
- processVol<opSet, SINO>(D_projData, 1.0f, projPitch, dims.iProjDets, dims.iProjAngles);
+ processVol<opSet>(D_projData, 1.0f, projPitch, dims.iProjDets, dims.iProjAngles);
callBP(D_pixelWeight, pixelPitch, D_projData, projPitch);
}
- processVol<opInvert, VOL>(D_pixelWeight, pixelPitch, dims.iVolWidth, dims.iVolHeight);
+ processVol<opInvert>(D_pixelWeight, pixelPitch, dims.iVolWidth, dims.iVolHeight);
if (useVolumeMask) {
// scale pixel weights with mask to zero out masked pixels
- processVol<opMul, VOL>(D_pixelWeight, D_maskData, pixelPitch, dims.iVolWidth, dims.iVolHeight);
+ processVol<opMul>(D_pixelWeight, D_maskData, pixelPitch, dims.iVolWidth, dims.iVolHeight);
}
return true;
@@ -160,7 +160,7 @@ bool SIRT::uploadMinMaxMasks(const float* pfMinMaskData, const float* pfMaxMaskD
freeMinMaxMasks = true;
bool ok = true;
if (pfMinMaskData) {
- allocateVolume(D_minMaskData, dims.iVolWidth+2, dims.iVolHeight+2, minMaskPitch);
+ allocateVolume(D_minMaskData, dims.iVolWidth, dims.iVolHeight, minMaskPitch);
ok = copyVolumeToDevice(pfMinMaskData, iPitch,
dims.iVolWidth, dims.iVolHeight,
D_minMaskData, minMaskPitch);
@@ -169,7 +169,7 @@ bool SIRT::uploadMinMaxMasks(const float* pfMinMaskData, const float* pfMaxMaskD
return false;
if (pfMaxMaskData) {
- allocateVolume(D_maxMaskData, dims.iVolWidth+2, dims.iVolHeight+2, maxMaskPitch);
+ allocateVolume(D_maxMaskData, dims.iVolWidth, dims.iVolHeight, maxMaskPitch);
ok = copyVolumeToDevice(pfMaxMaskData, iPitch,
dims.iVolWidth, dims.iVolHeight,
D_maxMaskData, maxMaskPitch);
@@ -191,33 +191,33 @@ bool SIRT::iterate(unsigned int iterations)
for (unsigned int iter = 0; iter < iterations && !shouldAbort; ++iter) {
// copy sinogram to projection data
- cudaMemcpy2D(D_projData, sizeof(float)*projPitch, D_sinoData, sizeof(float)*sinoPitch, sizeof(float)*(dims.iProjDets+2), dims.iProjAngles, cudaMemcpyDeviceToDevice);
+ cudaMemcpy2D(D_projData, sizeof(float)*projPitch, D_sinoData, sizeof(float)*sinoPitch, sizeof(float)*(dims.iProjDets), dims.iProjAngles, cudaMemcpyDeviceToDevice);
// do FP, subtracting projection from sinogram
if (useVolumeMask) {
- cudaMemcpy2D(D_tmpData, sizeof(float)*tmpPitch, D_volumeData, sizeof(float)*volumePitch, sizeof(float)*(dims.iVolWidth+2), dims.iVolHeight+2, cudaMemcpyDeviceToDevice);
- processVol<opMul, VOL>(D_tmpData, D_maskData, tmpPitch, dims.iVolWidth, dims.iVolHeight);
+ cudaMemcpy2D(D_tmpData, sizeof(float)*tmpPitch, D_volumeData, sizeof(float)*volumePitch, sizeof(float)*(dims.iVolWidth), dims.iVolHeight, cudaMemcpyDeviceToDevice);
+ processVol<opMul>(D_tmpData, D_maskData, tmpPitch, dims.iVolWidth, dims.iVolHeight);
callFP(D_tmpData, tmpPitch, D_projData, projPitch, -1.0f);
} else {
callFP(D_volumeData, volumePitch, D_projData, projPitch, -1.0f);
}
- processVol<opMul, SINO>(D_projData, D_lineWeight, projPitch, dims.iProjDets, dims.iProjAngles);
+ processVol<opMul>(D_projData, D_lineWeight, projPitch, dims.iProjDets, dims.iProjAngles);
- zeroVolume(D_tmpData, tmpPitch, dims.iVolWidth+2, dims.iVolHeight+2);
+ zeroVolume(D_tmpData, tmpPitch, dims.iVolWidth, dims.iVolHeight);
callBP(D_tmpData, tmpPitch, D_projData, projPitch);
- processVol<opAddMul, VOL>(D_volumeData, D_pixelWeight, D_tmpData, volumePitch, dims.iVolWidth, dims.iVolHeight);
+ processVol<opAddMul>(D_volumeData, D_pixelWeight, D_tmpData, volumePitch, dims.iVolWidth, dims.iVolHeight);
if (useMinConstraint)
- processVol<opClampMin, VOL>(D_volumeData, fMinConstraint, volumePitch, dims.iVolWidth, dims.iVolHeight);
+ processVol<opClampMin>(D_volumeData, fMinConstraint, volumePitch, dims.iVolWidth, dims.iVolHeight);
if (useMaxConstraint)
- processVol<opClampMax, VOL>(D_volumeData, fMaxConstraint, volumePitch, dims.iVolWidth, dims.iVolHeight);
+ processVol<opClampMax>(D_volumeData, fMaxConstraint, volumePitch, dims.iVolWidth, dims.iVolHeight);
if (D_minMaskData)
- processVol<opClampMinMask, VOL>(D_volumeData, D_minMaskData, volumePitch, dims.iVolWidth, dims.iVolHeight);
+ processVol<opClampMinMask>(D_volumeData, D_minMaskData, volumePitch, dims.iVolWidth, dims.iVolHeight);
if (D_maxMaskData)
- processVol<opClampMaxMask, VOL>(D_volumeData, D_maxMaskData, volumePitch, dims.iVolWidth, dims.iVolHeight);
+ processVol<opClampMaxMask>(D_volumeData, D_maxMaskData, volumePitch, dims.iVolWidth, dims.iVolHeight);
}
return true;
@@ -226,12 +226,12 @@ bool SIRT::iterate(unsigned int iterations)
float SIRT::computeDiffNorm()
{
// copy sinogram to projection data
- cudaMemcpy2D(D_projData, sizeof(float)*projPitch, D_sinoData, sizeof(float)*sinoPitch, sizeof(float)*(dims.iProjDets+2), dims.iProjAngles, cudaMemcpyDeviceToDevice);
+ cudaMemcpy2D(D_projData, sizeof(float)*projPitch, D_sinoData, sizeof(float)*sinoPitch, sizeof(float)*(dims.iProjDets), dims.iProjAngles, cudaMemcpyDeviceToDevice);
// do FP, subtracting projection from sinogram
if (useVolumeMask) {
- cudaMemcpy2D(D_tmpData, sizeof(float)*tmpPitch, D_volumeData, sizeof(float)*volumePitch, sizeof(float)*(dims.iVolWidth+2), dims.iVolHeight+2, cudaMemcpyDeviceToDevice);
- processVol<opMul, VOL>(D_tmpData, D_maskData, tmpPitch, dims.iVolWidth, dims.iVolHeight);
+ cudaMemcpy2D(D_tmpData, sizeof(float)*tmpPitch, D_volumeData, sizeof(float)*volumePitch, sizeof(float)*(dims.iVolWidth), dims.iVolHeight, cudaMemcpyDeviceToDevice);
+ processVol<opMul>(D_tmpData, D_maskData, tmpPitch, dims.iVolWidth, dims.iVolHeight);
callFP(D_tmpData, tmpPitch, D_projData, projPitch, -1.0f);
} else {
callFP(D_volumeData, volumePitch, D_projData, projPitch, -1.0f);
@@ -240,7 +240,7 @@ float SIRT::computeDiffNorm()
// compute norm of D_projData
- float s = dotProduct2D(D_projData, projPitch, dims.iProjDets, dims.iProjAngles, 1, 0);
+ float s = dotProduct2D(D_projData, projPitch, dims.iProjDets, dims.iProjAngles);
return sqrt(s);
}
@@ -300,12 +300,12 @@ int main()
dims.iRaysPerDet = 1;
unsigned int volumePitch, sinoPitch;
- allocateVolume(D_volumeData, dims.iVolWidth+2, dims.iVolHeight+2, volumePitch);
- zeroVolume(D_volumeData, volumePitch, dims.iVolWidth+2, dims.iVolHeight+2);
+ allocateVolume(D_volumeData, dims.iVolWidth, dims.iVolHeight, volumePitch);
+ zeroVolume(D_volumeData, volumePitch, dims.iVolWidth, dims.iVolHeight);
printf("pitch: %u\n", volumePitch);
- allocateVolume(D_sinoData, dims.iProjDets+2, dims.iProjAngles, sinoPitch);
- zeroVolume(D_sinoData, sinoPitch, dims.iProjDets+2, dims.iProjAngles);
+ allocateVolume(D_sinoData, dims.iProjDets, dims.iProjAngles, sinoPitch);
+ zeroVolume(D_sinoData, sinoPitch, dims.iProjDets, dims.iProjAngles);
printf("pitch: %u\n", sinoPitch);
unsigned int y, x;
generated by cgit v1.2.3 (git 2.25.1) at 2024-11-15 04:12:30 +0000