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* Merge branch 'master' into parallel_vecWillem Jan Palenstijn2016-10-0729-661/+809
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| * Merge pull request #42 from wjp/FDKWillem Jan Palenstijn2016-10-0713-254/+208
| |\ | | | | | | Use CompositeGeometryManager for FDK
| | * Merge branch 'master' into FDKWillem Jan Palenstijn2016-10-070-0/+0
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| * | Merge pull request #41 from wjp/anisoWillem Jan Palenstijn2016-10-0719-238/+386
| |\ \ | | | | | | | | Add support for non-cube voxels
| | * \ Merge branch 'master' into anisoWillem Jan Palenstijn2016-04-225-311/+3330
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| | | | * Merge branch 'master' into FDKWillem Jan Palenstijn2016-10-0620-408/+450
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| * | | | Merge pull request #62 from wjp/stringutilWillem Jan Palenstijn2016-07-294-38/+37
| |\ \ \ \ | | | | | | | | | | | | Minor string parsing changes
| | * | | | Replace use of boost::split by own functionWillem Jan Palenstijn2016-07-284-29/+31
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| | * | | | Convert one more string parsing function to stringToDoubleWillem Jan Palenstijn2016-07-281-9/+6
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| * | | | | Merge pull request #58 from wjp/volume_reductionWillem Jan Palenstijn2016-07-291-137/+184
| |\ \ \ \ \ | | | | | | | | | | | | | | Improve efficiency of CGM volume block reduction
| | * | | | | Fix inefficient block split logicWillem Jan Palenstijn2016-06-201-5/+19
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| | * | | | | Improve volume block reductionWillem Jan Palenstijn2016-06-201-132/+165
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The previous version would make the blocks too large due to inefficient computation of overlap.
| | | | | | * Merge branch 'master' into FDKWillem Jan Palenstijn2016-04-224-327/+3395
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| | | | | | * | Use CompositeGeometryManager for FDKWillem Jan Palenstijn2016-04-1811-249/+240
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Also fix a number of scaling/weighting issues in FDK, and switch to standard cone_bp with FDKWeighting for the BP step.
| | | | | | * | Add FDKWeighting option to standard cone_bpWillem Jan Palenstijn2016-04-182-4/+12
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| | | | * | | Merge branch 'master' into anisoWillem Jan Palenstijn2016-04-1873-874/+1693
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| | | | * | | | Restrict FDK_CUDA to cube voxels for nowWillem Jan Palenstijn2016-04-181-0/+11
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| | | | * | | | Adapt 3D BP scaling to voxel sizeWillem Jan Palenstijn2016-04-182-4/+8
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| | | | * | | | Move detector-independent vars out of loopWillem Jan Palenstijn2016-04-181-14/+12
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| | | | * | | | Add voxel-size scaling to par3d_fpWillem Jan Palenstijn2016-04-181-16/+92
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| | | | * | | | Refactor voxel size scaling CUDA kernel, and special-case cubesWillem Jan Palenstijn2016-04-181-26/+62
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| | | | * | | | Process non-cubic-voxel astra geometriesWillem Jan Palenstijn2016-02-102-30/+37
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| | | | * | | | Add cone_fp kernel support for anisotropic voxelsWillem Jan Palenstijn2016-02-102-10/+31
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| | | | * | | | Refactor CUDA projector params into structWillem Jan Palenstijn2016-02-1017-190/+185
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* | | | | | | | Fix memory leak in CPU projectorsWillem Jan Palenstijn2016-07-293-0/+8
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* | | | | | | | Add CUDA parvec supportWillem Jan Palenstijn2016-07-2936-1715/+1179
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* | | | | | | | Merge branch 'master' into parvecWillem Jan Palenstijn2016-07-28291-13209/+12011
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| * | | | | | | Remove leftover code from SingletonWillem Jan Palenstijn2016-07-281-5/+1
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| * | | | | | Merge pull request #59 from wjp/spatial_filterWillem Jan Palenstijn2016-07-281-7/+39
| |\ \ \ \ \ \ | | |/ / / / / | |/| | | | | Compute FBP filter in spatial domain
| | * | | | | Compute FBP filter in spatial domainWillem Jan Palenstijn2016-06-241-7/+39
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| * | | | | Merge pull request #55 from wjp/singleton_constructionWillem Jan Palenstijn2016-05-171-4/+18
| |\ \ \ \ \ | | | | | | | | | | | | | | Avoid defining singleton construction in header file
| | * | | | | Add sanity checkWillem Jan Palenstijn2016-05-171-2/+2
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| | * | | | | Avoid defining singleton construction in header fileWillem Jan Palenstijn2016-05-171-4/+18
| |/ / / / / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | That way, the call to new is always executed by code inside libastra. This avoids the situation where a singleton gets created by a copy of the constructor linked into an object file outside of libastra, such as a .mex file, which would then also cause the vtable to be outside of libastra. This situation would cause issues when .mex files are unloaded.
| * | | | | Merge pull request #47 from wjp/OpTomo_outWillem Jan Palenstijn2016-04-262-43/+87
| |\ \ \ \ \ | | | | | | | | | | | | | | Give OpTomo FP/BP functions with optional out argument
| | * | | | | Use FP/BP out argument in sample pluginWillem Jan Palenstijn2016-04-261-13/+21
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| | * | | | | Give OpTomo FP/BP functions with optional out argumentWillem Jan Palenstijn2016-04-251-30/+66
| | | | | | | | | | | | | | | | | | | | | | | | | | | | This allows more efficient use of allocated arrays.
| * | | | | | Merge pull request #46 from dmpelt/python_cxxWillem Jan Palenstijn2016-04-252-2/+6
| |\ \ \ \ \ \ | | | | | | | | | | | | | | | | Use CXX for Python compilation as well
| | * | | | | | Add comment about setting CC to CXXDaniel M. Pelt2016-04-191-0/+2
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| | * | | | | | Use CXX for Python compilation as wellDaniel M. Pelt2016-04-192-2/+4
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| * | | | | | Merge pull request #50 from wjp/data3d_dimensionsWillem Jan Palenstijn2016-04-251-1/+1
| |\ \ \ \ \ \ | | |_|/ / / / | |/| | | | | Reverse output of astra.data3d.dimensions
| | * | | | | Reverse output of astra.data3d.dimensionsWillem Jan Palenstijn2016-04-251-1/+1
| | | |_|/ / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | This makes the output directly usable in numpy commands like zeros, reshape. We were not using data3d.dimensions ourselves, as far as I can tell.
| * | | | | Merge pull request #49 from dmpelt/flatten_to_ravelWillem Jan Palenstijn2016-04-254-7/+7
| |\ \ \ \ \ | | |/ / / / | |/| | | | Change flatten to ravel in Python code
| | * | | | Change flatten to ravel in Python codeDaniel M. Pelt2016-04-254-7/+7
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| * | | | Fix buildWillem Jan Palenstijn2016-04-221-1/+1
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| * | | | Fix buildWillem Jan Palenstijn2016-04-223-132/+78
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| * | | | Merge pull request #43 from adler-j/patch-1Willem Jan Palenstijn2016-04-221-1/+1
| |\ \ \ \ | | |_|_|/ | |/| | | Fix missing backslash in readme.md install
| | * | | Fix missing backslash in readme.md installJonas Adler2016-04-191-1/+1
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| * | | Merge pull request #48 from dmpelt/cpu_fft_fixWillem Jan Palenstijn2016-04-223-309/+3382
| |\ \ \ | | |/ / | |/| | Change CPU FFT implementation
| | * | Change CPU FFT implementationDaniel M. Pelt2016-04-223-309/+3382
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| * | Fix stringToInt parsing doublesWillem Jan Palenstijn2016-04-181-1/+1
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