From 3cae1d138c53a3fd042de3d2c9d9a07cf0650e0f Mon Sep 17 00:00:00 2001 From: "Daniel M. Pelt" Date: Tue, 24 Feb 2015 12:35:45 +0100 Subject: Added Python interface --- build/linux/Makefile.in | 45 +++++++++++++++++++++++++++++++++++++++++++-- build/linux/configure.ac | 31 ++++++++++++++++++++++++------- 2 files changed, 67 insertions(+), 9 deletions(-) (limited to 'build/linux') diff --git a/build/linux/Makefile.in b/build/linux/Makefile.in index 685e1e5..fe1ba91 100644 --- a/build/linux/Makefile.in +++ b/build/linux/Makefile.in @@ -1,5 +1,7 @@ cuda=@HAVECUDA@ matlab=@HAVEMATLAB@ +python=@HAVEPYTHON@ + MATLAB_ROOT=@MATLAB_ROOT@ @@ -9,6 +11,10 @@ ifeq ($(matlab),yes) TARGETS+=mex endif +ifeq ($(python),yes) +TARGETS+=py +endif + all: $(TARGETS) prefix=@prefix@ @@ -39,6 +45,14 @@ CXXFLAGS+=-fopenmp LDFLAGS+=-fopenmp endif +ifeq ($(python),yes) +PYCPPFLAGS = ${CPPFLAGS} +PYCPPFLAGS += -I../include +PYLDFLAGS = ${LDFLAGS} +PYLDFLAGS += -L../build/linux/.libs +PYTHON = @PYTHON@ +endif + BOOST_CPPFLAGS= BOOST_LDFLAGS= @@ -53,7 +67,7 @@ LD=@CXX@ SHELL=@SHELL@ ifeq ($(matlab),yes) -MEXFLAGS = -cxx +MEXFLAGS = -cxx MEXLDFLAGS='$$LDFLAGS $(LDFLAGS)' MEXLIBS = -L.libs -lut MEXSUFFIX = @MEXSUFFIX@ @@ -226,6 +240,14 @@ mex: $(MATLAB_MEX) $(MEX) LDFLAGS=$(MEXLDFLAGS) $(MEXFLAGS) $(LIBS) $(MEXLIBS) -lastra -output $* $*.o $(MATLAB_CXX_OBJECTS) endif +ifeq ($(python),yes) +py: libastra.la + cd ../../python; CPPFLAGS="${PYCPPFLAGS}" LDFLAGS="${PYLDFLAGS}" $(PYTHON) builder.py install \ + --install-base=./finalbuild --install-headers=./finalbuild --install-purelib=./finalbuild \ + --install-platlib=./finalbuild --install-scripts=./finalbuild --install-data=./finalbuild +endif + + libastra.la: $(ALL_OBJECTS) ./libtool --mode=link --tag=CXX $(LD) -rpath $(LIBDIR) -o $@ $(LDFLAGS) $(LIBS) $+ @@ -278,6 +300,8 @@ clean: rm -f $(addsuffix /*.d,$(DEPDIRS)) rm -f $(addsuffix /*,$(LIBDIRS)) rm -f $(TEST_OBJECTS) test.bin + rm -fr ../../python/finalbuild/ + rm -fr ../../python/build/ distclean: clean rm -f config.guess config.sub ltmain.sh libtool install-sh @@ -286,7 +310,7 @@ distclean: clean rm -rf autom4te.cache rm -f configure Makefile -install: install-libraries install-matlab +install: install-libraries install-matlab install-python install-libraries: libastra.la ./install-sh -m 755 -d @libdir@ @@ -306,6 +330,23 @@ else install-matlab: endif +ifeq ($(python),yes) +# TODO: This install location doesn't work well for /usr or /usr/local +install-python: py + ./install-sh -m 755 -d @prefix@/python + ./install-sh -m 755 -d @prefix@/python/astra + ./install-sh -m 644 ../../python/finalbuild/astra/*.so @prefix@/python/astra + ./install-sh -m 644 ../../python/finalbuild/astra/*.py @prefix@/python/astra + ./install-sh -m 644 ../../python/finalbuild/*.egg-info @prefix@/python/ + @echo "++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++" + @echo "To use ASTRA in Python, add @prefix@/python/ to your PYTHONPATH" + @echo "and @libdir@ to your LD_LIBRARY_PATH." + @echo "++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++" +# TODO: docs +else +install-python: +endif + Makefile: Makefile.in config.status CONFIG_HEADERS= CONFIG_LINKS= CONFIG_FILES=$@ $(SHELL) ./config.status diff --git a/build/linux/configure.ac b/build/linux/configure.ac index f99c4d3..7ad03c3 100644 --- a/build/linux/configure.ac +++ b/build/linux/configure.ac @@ -1,26 +1,26 @@ dnl ----------------------------------------------------------------------- dnl Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp dnl 2014-2015, CWI, Amsterdam -dnl +dnl dnl Contact: astra@uantwerpen.be dnl Website: http://sf.net/projects/astra-toolbox -dnl +dnl dnl This file is part of the ASTRA Toolbox. -dnl -dnl +dnl +dnl dnl The ASTRA Toolbox is free software: you can redistribute it and/or modify dnl it under the terms of the GNU General Public License as published by dnl the Free Software Foundation, either version 3 of the License, or dnl (at your option) any later version. -dnl +dnl dnl The ASTRA Toolbox is distributed in the hope that it will be useful, dnl but WITHOUT ANY WARRANTY; without even the implied warranty of dnl MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the dnl GNU General Public License for more details. -dnl +dnl dnl You should have received a copy of the GNU General Public License dnl along with the ASTRA Toolbox. If not, see . -dnl +dnl dnl ----------------------------------------------------------------------- dnl $Id$ @@ -166,6 +166,23 @@ fi AC_SUBST(HAVEMATLAB) +# python + +AC_ARG_WITH(python, [[ --with-python=path path of Python (optional)]],,) + +PY_PATH=$PATH +HAVEPYTHON=no +if test x"$with_python" != x; then + PY_PATH="$with_python:$PY_PATH" + AC_PATH_PROG([PYTHON], [python], [no], [$PY_PATH]) + if test x"$PYTHON" != xno; then + HAVEPYTHON=yes + AC_SUBST(PYTHON) + fi +fi + +AC_SUBST(HAVEPYTHON) + # TODO: -- cgit v1.2.3 From 153b480b267a2d62e3b2d671d8018ab6e55dc8c4 Mon Sep 17 00:00:00 2001 From: "Daniel M. Pelt" Date: Tue, 24 Feb 2015 14:19:34 +0100 Subject: Better Python configure checks --- build/linux/configure.ac | 31 ++++++++++++++++++++++++------- 1 file changed, 24 insertions(+), 7 deletions(-) (limited to 'build/linux') diff --git a/build/linux/configure.ac b/build/linux/configure.ac index f4cc82e..f9755f9 100644 --- a/build/linux/configure.ac +++ b/build/linux/configure.ac @@ -162,17 +162,34 @@ AC_SUBST(HAVEMATLAB) # python -AC_ARG_WITH(python, [[ --with-python=path path of Python (optional)]],,) +AC_ARG_WITH(python, [[ --with-python=path path of Python binary (optional)]],,) -PY_PATH=$PATH HAVEPYTHON=no if test x"$with_python" != x; then - PY_PATH="$with_python:$PY_PATH" - AC_PATH_PROG([PYTHON], [python], [no], [$PY_PATH]) - if test x"$PYTHON" != xno; then - HAVEPYTHON=yes - AC_SUBST(PYTHON) + AC_CHECK_FILE([$with_python],[PYTHON=$with_python],[AC_PATH_PROG([PYTHON], [$with_python], [AC_MSG_ERROR(Python binary not found)], [$PATH])]) + HAVEPYTHON=yes + AC_SUBST(PYTHON) + AC_MSG_CHECKING(for numpy module) + echo "import numpy" | $PYTHON - + if test $? -ne 0 ; then + AC_MSG_RESULT(not found) + AC_MSG_ERROR(You need the numpy module to use the ASTRA toolbox in Python) fi + AC_MSG_RESULT(found) + AC_MSG_CHECKING(for Cython module) + echo "import Cython;from distutils.version import LooseVersion;assert(LooseVersion(Cython.__version__)>=LooseVersion('0.13'))" | $PYTHON - + if test $? -ne 0 ; then + AC_MSG_RESULT(not found) + AC_MSG_ERROR(You need the Cython module (version >=0.13) to use the ASTRA toolbox in Python) + fi + AC_MSG_RESULT(found) + AC_MSG_CHECKING(for six module) + echo "import six" | $PYTHON - + if test $? -ne 0 ; then + AC_MSG_RESULT(not found) + AC_MSG_ERROR(You need the six module to use the ASTRA toolbox in Python) + fi + AC_MSG_RESULT(found) fi AC_SUBST(HAVEPYTHON) -- cgit v1.2.3 From 22f0c35dd2576b0121992ab09fe89e68c6532459 Mon Sep 17 00:00:00 2001 From: Willem Jan Palenstijn Date: Wed, 25 Feb 2015 10:48:59 +0100 Subject: Simplify with-python handling --- build/linux/configure.ac | 15 +++++++++++++-- 1 file changed, 13 insertions(+), 2 deletions(-) (limited to 'build/linux') diff --git a/build/linux/configure.ac b/build/linux/configure.ac index f9755f9..525ca9d 100644 --- a/build/linux/configure.ac +++ b/build/linux/configure.ac @@ -165,8 +165,18 @@ AC_SUBST(HAVEMATLAB) AC_ARG_WITH(python, [[ --with-python=path path of Python binary (optional)]],,) HAVEPYTHON=no -if test x"$with_python" != x; then - AC_CHECK_FILE([$with_python],[PYTHON=$with_python],[AC_PATH_PROG([PYTHON], [$with_python], [AC_MSG_ERROR(Python binary not found)], [$PATH])]) +if test x"$with_python" != x -a x"$with_python" != xno; then + if test x"$with_python" = xyes; then + PYTHON=python + else + PYTHON="$with_python" + fi + AC_MSG_CHECKING(for python) + ASTRA_RUN_LOGOUTPUT(echo 'import sys' | $PYTHON -) + if test $? -ne 0; then + AC_MSG_ERROR(Python binary not found)] + fi + AC_MSG_RESULT([$PYTHON]) HAVEPYTHON=yes AC_SUBST(PYTHON) AC_MSG_CHECKING(for numpy module) @@ -215,6 +225,7 @@ echo echo "Summary of ASTRA Toolbox build options:" echo " CUDA : $HAVECUDA" echo " Matlab : $HAVEMATLAB" +echo " Python : $HAVEPYTHON" echo echo " prefix : $prefix" echo -- cgit v1.2.3 From e0aca18f687e9f49223ffb24b9be354bed4b150a Mon Sep 17 00:00:00 2001 From: Willem Jan Palenstijn Date: Wed, 25 Feb 2015 10:49:08 +0100 Subject: Add logging for python module checks --- build/linux/acinclude.m4 | 12 ++++++++++++ build/linux/configure.ac | 28 ++++++++++++++++------------ 2 files changed, 28 insertions(+), 12 deletions(-) (limited to 'build/linux') diff --git a/build/linux/acinclude.m4 b/build/linux/acinclude.m4 index 713b5d3..e4b6de7 100644 --- a/build/linux/acinclude.m4 +++ b/build/linux/acinclude.m4 @@ -70,6 +70,18 @@ AC_DEFUN([ASTRA_RUN_LOGOUTPUT],[{ }]) +dnl ASTRA_TRY_PYTHON(code, action-if-ok, action-if-not-ok) +AC_DEFUN([ASTRA_TRY_PYTHON],[ +cat >conftest.py <<_ACEOF +$1 +_ACEOF +ASTRA_RUN_LOGOUTPUT($PYTHON conftest.py) +AS_IF([test $? = 0],[$2],[ + AS_ECHO(["$as_me: failed program was:"]) >&AS_MESSAGE_LOG_FD + sed 's/^/| /' conftest.py >&AS_MESSAGE_LOG_FD + $3]) +]) + dnl ASTRA_CHECK_NVCC(variable-to-set,cppflags-to-set) AC_DEFUN([ASTRA_CHECK_NVCC],[ diff --git a/build/linux/configure.ac b/build/linux/configure.ac index 525ca9d..b97a7a0 100644 --- a/build/linux/configure.ac +++ b/build/linux/configure.ac @@ -180,26 +180,30 @@ if test x"$with_python" != x -a x"$with_python" != xno; then HAVEPYTHON=yes AC_SUBST(PYTHON) AC_MSG_CHECKING(for numpy module) - echo "import numpy" | $PYTHON - - if test $? -ne 0 ; then - AC_MSG_RESULT(not found) + ASTRA_TRY_PYTHON([import numpy],,HAVEPYTHON=no) + if test x$HAVEPYTHON = xno; then + AC_MSG_RESULT(no) AC_MSG_ERROR(You need the numpy module to use the ASTRA toolbox in Python) fi - AC_MSG_RESULT(found) + AC_MSG_RESULT(yes) AC_MSG_CHECKING(for Cython module) - echo "import Cython;from distutils.version import LooseVersion;assert(LooseVersion(Cython.__version__)>=LooseVersion('0.13'))" | $PYTHON - - if test $? -ne 0 ; then - AC_MSG_RESULT(not found) + ASTRA_TRY_PYTHON([ +import Cython +from distutils.version import LooseVersion +assert(LooseVersion(Cython.__version__)>=LooseVersion("0.13")) +],,HAVEPYTHON=no) + if test x$HAVEPYTHON = xno; then + AC_MSG_RESULT(no) AC_MSG_ERROR(You need the Cython module (version >=0.13) to use the ASTRA toolbox in Python) fi - AC_MSG_RESULT(found) + AC_MSG_RESULT(yes) AC_MSG_CHECKING(for six module) - echo "import six" | $PYTHON - - if test $? -ne 0 ; then - AC_MSG_RESULT(not found) + ASTRA_TRY_PYTHON([import six]) + if test x$HAVEPYTHON = xno; then + AC_MSG_RESULT(no) AC_MSG_ERROR(You need the six module to use the ASTRA toolbox in Python) fi - AC_MSG_RESULT(found) + AC_MSG_RESULT(yes) fi AC_SUBST(HAVEPYTHON) -- cgit v1.2.3