/* ----------------------------------------------------------------------- Copyright 2012 iMinds-Vision Lab, University of Antwerp Contact: astra@ua.ac.be Website: http://astra.ua.ac.be This file is part of the All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). The ASTRA Toolbox is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. The ASTRA Toolbox is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with the ASTRA Toolbox. If not, see . ----------------------------------------------------------------------- $Id$ */ #include #include "algo.h" #include "par_fp.h" #include "fan_fp.h" #include "par_bp.h" #include "fan_bp.h" #include "util.h" #include "arith.h" namespace astraCUDA { ReconAlgo::ReconAlgo() { angles = 0; TOffsets = 0; fanProjs = 0; shouldAbort = false; useVolumeMask = false; useSinogramMask = false; D_maskData = 0; D_smaskData = 0; D_sinoData = 0; D_volumeData = 0; useMinConstraint = false; useMaxConstraint = false; freeGPUMemory = false; } ReconAlgo::~ReconAlgo() { reset(); } void ReconAlgo::reset() { delete[] angles; delete[] TOffsets; delete[] fanProjs; if (freeGPUMemory) { cudaFree(D_maskData); cudaFree(D_smaskData); cudaFree(D_sinoData); cudaFree(D_volumeData); } angles = 0; TOffsets = 0; fanProjs = 0; shouldAbort = false; useVolumeMask = false; useSinogramMask = false; D_maskData = 0; D_smaskData = 0; D_sinoData = 0; D_volumeData = 0; useMinConstraint = false; useMaxConstraint = false; freeGPUMemory = false; } bool ReconAlgo::setGPUIndex(int iGPUIndex) { if (iGPUIndex != -1) { cudaSetDevice(iGPUIndex); cudaError_t err = cudaGetLastError(); // Ignore errors caused by calling cudaSetDevice multiple times if (err != cudaSuccess && err != cudaErrorSetOnActiveProcess) return false; } return true; } bool ReconAlgo::enableVolumeMask() { useVolumeMask = true; return true; } bool ReconAlgo::enableSinogramMask() { useSinogramMask = true; return true; } bool ReconAlgo::setGeometry(const SDimensions& _dims, const float* _angles) { dims = _dims; angles = new float[dims.iProjAngles]; memcpy(angles, _angles, sizeof(angles[0]) * dims.iProjAngles); delete[] fanProjs; fanProjs = 0; return true; } bool ReconAlgo::setFanGeometry(const SDimensions& _dims, const SFanProjection* _projs) { dims = _dims; fanProjs = new SFanProjection[dims.iProjAngles]; memcpy(fanProjs, _projs, sizeof(fanProjs[0]) * dims.iProjAngles); delete[] angles; angles = 0; return true; } bool ReconAlgo::setTOffsets(const float* _TOffsets) { // TODO: determine if they're all zero? TOffsets = new float[dims.iProjAngles]; memcpy(TOffsets, _TOffsets, sizeof(angles[0]) * dims.iProjAngles); return true; } bool ReconAlgo::setVolumeMask(float* _D_maskData, unsigned int _maskPitch) { assert(useVolumeMask); D_maskData = _D_maskData; maskPitch = _maskPitch; return true; } bool ReconAlgo::setSinogramMask(float* _D_smaskData, unsigned int _smaskPitch) { assert(useSinogramMask); D_smaskData = _D_smaskData; smaskPitch = _smaskPitch; return true; } bool ReconAlgo::setBuffers(float* _D_volumeData, unsigned int _volumePitch, float* _D_projData, unsigned int _projPitch) { D_volumeData = _D_volumeData; volumePitch = _volumePitch; D_sinoData = _D_projData; sinoPitch = _projPitch; return true; } bool ReconAlgo::setMinConstraint(float fMin) { fMinConstraint = fMin; useMinConstraint = true; return true; } bool ReconAlgo::setMaxConstraint(float fMax) { fMaxConstraint = fMax; useMaxConstraint = true; return true; } bool ReconAlgo::allocateBuffers() { bool ok; ok = allocateVolume(D_volumeData, dims.iVolWidth+2, dims.iVolHeight+2, volumePitch); if (!ok) return false; ok = allocateVolume(D_sinoData, dims.iProjDets+2, dims.iProjAngles, sinoPitch); if (!ok) { cudaFree(D_volumeData); D_volumeData = 0; return false; } if (useVolumeMask) { ok = allocateVolume(D_maskData, dims.iVolWidth+2, dims.iVolHeight+2, maskPitch); if (!ok) { cudaFree(D_volumeData); cudaFree(D_sinoData); D_volumeData = 0; D_sinoData = 0; return false; } } if (useSinogramMask) { ok = allocateVolume(D_smaskData, dims.iProjDets+2, dims.iProjAngles, smaskPitch); if (!ok) { cudaFree(D_volumeData); cudaFree(D_sinoData); cudaFree(D_maskData); D_volumeData = 0; D_sinoData = 0; D_maskData = 0; return false; } } freeGPUMemory = true; return true; } bool ReconAlgo::copyDataToGPU(const float* pfSinogram, unsigned int iSinogramPitch, float fSinogramScale, const float* pfReconstruction, unsigned int iReconstructionPitch, const float* pfVolMask, unsigned int iVolMaskPitch, const float* pfSinoMask, unsigned int iSinoMaskPitch) { if (!pfSinogram) return false; if (!pfReconstruction) return false; bool ok = copySinogramToDevice(pfSinogram, iSinogramPitch, dims.iProjDets, dims.iProjAngles, D_sinoData, sinoPitch); if (!ok) return false; // rescale sinogram to adjust for pixel size processVol(D_sinoData, fSinogramScale, //1.0f/(fPixelSize*fPixelSize), sinoPitch, dims.iProjDets, dims.iProjAngles); ok = copyVolumeToDevice(pfReconstruction, iReconstructionPitch, dims.iVolWidth, dims.iVolHeight, D_volumeData, volumePitch); if (!ok) return false; if (useVolumeMask) { if (!pfVolMask) return false; ok = copyVolumeToDevice(pfVolMask, iVolMaskPitch, dims.iVolWidth, dims.iVolHeight, D_maskData, maskPitch); if (!ok) return false; } if (useSinogramMask) { if (!pfSinoMask) return false; ok = copySinogramToDevice(pfSinoMask, iSinoMaskPitch, dims.iProjDets, dims.iProjAngles, D_smaskData, smaskPitch); if (!ok) return false; } return true; } bool ReconAlgo::getReconstruction(float* pfReconstruction, unsigned int iReconstructionPitch) const { bool ok = copyVolumeFromDevice(pfReconstruction, iReconstructionPitch, dims.iVolWidth, dims.iVolHeight, D_volumeData, volumePitch); if (!ok) return false; return true; } bool ReconAlgo::callFP(float* D_volumeData, unsigned int volumePitch, float* D_projData, unsigned int projPitch, float outputScale) { if (angles) { assert(!fanProjs); return FP(D_volumeData, volumePitch, D_projData, projPitch, dims, angles, TOffsets, outputScale); } else { assert(fanProjs); return FanFP(D_volumeData, volumePitch, D_projData, projPitch, dims, fanProjs, outputScale); } } bool ReconAlgo::callBP(float* D_volumeData, unsigned int volumePitch, float* D_projData, unsigned int projPitch) { if (angles) { assert(!fanProjs); return BP(D_volumeData, volumePitch, D_projData, projPitch, dims, angles, TOffsets); } else { assert(fanProjs); return FanBP(D_volumeData, volumePitch, D_projData, projPitch, dims, fanProjs); } } }