/*
-----------------------------------------------------------------------
Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp
2014-2015, CWI, Amsterdam
Contact: astra@uantwerpen.be
Website: http://sf.net/projects/astra-toolbox
This file is part of the ASTRA Toolbox.
The ASTRA Toolbox is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
The ASTRA Toolbox is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with the ASTRA Toolbox. If not, see .
-----------------------------------------------------------------------
$Id$
*/
#include "astra/ParallelVecProjectionGeometry3D.h"
#include
#include
using namespace std;
namespace astra
{
//----------------------------------------------------------------------------------------
// Default constructor.
CParallelVecProjectionGeometry3D::CParallelVecProjectionGeometry3D() :
CProjectionGeometry3D()
{
m_pProjectionAngles = 0;
}
//----------------------------------------------------------------------------------------
// Constructor.
CParallelVecProjectionGeometry3D::CParallelVecProjectionGeometry3D(int _iProjectionAngleCount,
int _iDetectorRowCount,
int _iDetectorColCount,
const SPar3DProjection* _pProjectionAngles
) :
CProjectionGeometry3D()
{
initialize(_iProjectionAngleCount,
_iDetectorRowCount,
_iDetectorColCount,
_pProjectionAngles);
}
//----------------------------------------------------------------------------------------
// Destructor.
CParallelVecProjectionGeometry3D::~CParallelVecProjectionGeometry3D()
{
delete[] m_pProjectionAngles;
}
//---------------------------------------------------------------------------------------
// Initialize - Config
bool CParallelVecProjectionGeometry3D::initialize(const Config& _cfg)
{
ASTRA_ASSERT(_cfg.self);
ConfigStackCheck CC("ParallelVecProjectionGeometry3D", this, _cfg);
XMLNode* node;
// TODO: Fix up class hierarchy... this class doesn't fit very well.
// initialization of parent class
//CProjectionGeometry3D::initialize(_cfg);
// Required: DetectorRowCount
node = _cfg.self->getSingleNode("DetectorRowCount");
ASTRA_CONFIG_CHECK(node, "ParallelVecProjectionGeometry3D", "No DetectorRowCount tag specified.");
m_iDetectorRowCount = boost::lexical_cast(node->getContent());
ASTRA_DELETE(node);
CC.markNodeParsed("DetectorRowCount");
// Required: DetectorCount
node = _cfg.self->getSingleNode("DetectorColCount");
ASTRA_CONFIG_CHECK(node, "", "No DetectorColCount tag specified.");
m_iDetectorColCount = boost::lexical_cast(node->getContent());
m_iDetectorTotCount = m_iDetectorRowCount * m_iDetectorColCount;
ASTRA_DELETE(node);
CC.markNodeParsed("DetectorColCount");
// Required: Vectors
node = _cfg.self->getSingleNode("Vectors");
ASTRA_CONFIG_CHECK(node, "ParallelVecProjectionGeometry3D", "No Vectors tag specified.");
vector data = node->getContentNumericalArrayDouble();
CC.markNodeParsed("Vectors");
ASTRA_DELETE(node);
ASTRA_CONFIG_CHECK(data.size() % 12 == 0, "ParallelVecProjectionGeometry3D", "Vectors doesn't consist of 12-tuples.");
m_iProjectionAngleCount = data.size() / 12;
m_pProjectionAngles = new SPar3DProjection[m_iProjectionAngleCount];
for (int i = 0; i < m_iProjectionAngleCount; ++i) {
SPar3DProjection& p = m_pProjectionAngles[i];
p.fRayX = data[12*i + 0];
p.fRayY = data[12*i + 1];
p.fRayZ = data[12*i + 2];
p.fDetUX = data[12*i + 6];
p.fDetUY = data[12*i + 7];
p.fDetUZ = data[12*i + 8];
p.fDetVX = data[12*i + 9];
p.fDetVY = data[12*i + 10];
p.fDetVZ = data[12*i + 11];
// The backend code currently expects the corner of the detector, while
// the matlab interface supplies the center
p.fDetSX = data[12*i + 3] - 0.5f * m_iDetectorRowCount * p.fDetVX - 0.5f * m_iDetectorColCount * p.fDetUX;
p.fDetSY = data[12*i + 4] - 0.5f * m_iDetectorRowCount * p.fDetVY - 0.5f * m_iDetectorColCount * p.fDetUY;
p.fDetSZ = data[12*i + 5] - 0.5f * m_iDetectorRowCount * p.fDetVZ - 0.5f * m_iDetectorColCount * p.fDetUZ;
}
// success
m_bInitialized = _check();
return m_bInitialized;
}
//----------------------------------------------------------------------------------------
// Initialization.
bool CParallelVecProjectionGeometry3D::initialize(int _iProjectionAngleCount,
int _iDetectorRowCount,
int _iDetectorColCount,
const SPar3DProjection* _pProjectionAngles)
{
m_iProjectionAngleCount = _iProjectionAngleCount;
m_iDetectorRowCount = _iDetectorRowCount;
m_iDetectorColCount = _iDetectorColCount;
m_pProjectionAngles = new SPar3DProjection[m_iProjectionAngleCount];
for (int i = 0; i < m_iProjectionAngleCount; ++i)
m_pProjectionAngles[i] = _pProjectionAngles[i];
// TODO: check?
// success
m_bInitialized = _check();
return m_bInitialized;
}
//----------------------------------------------------------------------------------------
// Clone
CProjectionGeometry3D* CParallelVecProjectionGeometry3D::clone() const
{
CParallelVecProjectionGeometry3D* res = new CParallelVecProjectionGeometry3D();
res->m_bInitialized = m_bInitialized;
res->m_iProjectionAngleCount = m_iProjectionAngleCount;
res->m_iDetectorRowCount = m_iDetectorRowCount;
res->m_iDetectorColCount = m_iDetectorColCount;
res->m_iDetectorTotCount = m_iDetectorTotCount;
res->m_fDetectorSpacingX = m_fDetectorSpacingX;
res->m_fDetectorSpacingY = m_fDetectorSpacingY;
res->m_pProjectionAngles = new SPar3DProjection[m_iProjectionAngleCount];
memcpy(res->m_pProjectionAngles, m_pProjectionAngles, sizeof(m_pProjectionAngles[0])*m_iProjectionAngleCount);
return res;
}
//----------------------------------------------------------------------------------------
// is equal
bool CParallelVecProjectionGeometry3D::isEqual(const CProjectionGeometry3D * _pGeom2) const
{
if (_pGeom2 == NULL) return false;
// try to cast argument to CParallelProjectionGeometry3D
const CParallelVecProjectionGeometry3D* pGeom2 = dynamic_cast(_pGeom2);
if (pGeom2 == NULL) return false;
// both objects must be initialized
if (!m_bInitialized || !pGeom2->m_bInitialized) return false;
// check all values
if (m_iProjectionAngleCount != pGeom2->m_iProjectionAngleCount) return false;
if (m_iDetectorRowCount != pGeom2->m_iDetectorRowCount) return false;
if (m_iDetectorColCount != pGeom2->m_iDetectorColCount) return false;
if (m_iDetectorTotCount != pGeom2->m_iDetectorTotCount) return false;
//if (m_fDetectorSpacingX != pGeom2->m_fDetectorSpacingX) return false;
//if (m_fDetectorSpacingY != pGeom2->m_fDetectorSpacingY) return false;
for (int i = 0; i < m_iProjectionAngleCount; ++i) {
if (memcmp(&m_pProjectionAngles[i], &pGeom2->m_pProjectionAngles[i], sizeof(m_pProjectionAngles[i])) != 0) return false;
}
return true;
}
//----------------------------------------------------------------------------------------
// is of type
bool CParallelVecProjectionGeometry3D::isOfType(const std::string& _sType) const
{
return (_sType == "parallel3d_vec");
}
//----------------------------------------------------------------------------------------
// Get the configuration object
Config* CParallelVecProjectionGeometry3D::getConfiguration() const
{
Config* cfg = new Config();
cfg->initialize("ProjectionGeometry3D");
cfg->self->addAttribute("type", "parallel3d");
cfg->self->addChildNode("DetectorRowCount", m_iDetectorRowCount);
cfg->self->addChildNode("DetectorColCount", m_iDetectorColCount);
std::string vectors = "";
for (int i = 0; i < m_iProjectionAngleCount; ++i) {
SPar3DProjection& p = m_pProjectionAngles[i];
vectors += boost::lexical_cast(p.fRayX) + ",";
vectors += boost::lexical_cast(p.fRayY) + ",";
vectors += boost::lexical_cast(p.fRayZ) + ",";
vectors += boost::lexical_cast(p.fDetSX + 0.5f*m_iDetectorRowCount*p.fDetVX + 0.5f*m_iDetectorColCount*p.fDetUX) + ",";
vectors += boost::lexical_cast(p.fDetSY + 0.5f*m_iDetectorRowCount*p.fDetVY + 0.5f*m_iDetectorColCount*p.fDetUY) + ",";
vectors += boost::lexical_cast(p.fDetSZ + 0.5f*m_iDetectorRowCount*p.fDetVZ + 0.5f*m_iDetectorColCount*p.fDetUZ) + ",";
vectors += boost::lexical_cast(p.fDetUX) + ",";
vectors += boost::lexical_cast(p.fDetUY) + ",";
vectors += boost::lexical_cast(p.fDetUZ) + ",";
vectors += boost::lexical_cast(p.fDetVX) + ",";
vectors += boost::lexical_cast(p.fDetVY) + ",";
vectors += boost::lexical_cast(p.fDetVZ);
if (i < m_iProjectionAngleCount-1) vectors += ';';
}
cfg->self->addChildNode("Vectors", vectors);
return cfg;
}
//----------------------------------------------------------------------------------------
CVector3D CParallelVecProjectionGeometry3D::getProjectionDirection(int _iProjectionIndex, int _iDetectorIndex) const
{
const SPar3DProjection& p = m_pProjectionAngles[_iProjectionIndex];
return CVector3D(p.fRayX, p.fRayY, p.fRayZ);
}
void CParallelVecProjectionGeometry3D::projectPoint(float32 fX, float32 fY, float32 fZ,
int iAngleIndex,
float32 &fU, float32 &fV) const
{
ASTRA_ASSERT(iAngleIndex >= 0);
ASTRA_ASSERT(iAngleIndex < m_iProjectionAngleCount);
double fUX, fUY, fUZ, fUC;
double fVX, fVY, fVZ, fVC;
computeBP_UV_Coeffs(m_pProjectionAngles[iAngleIndex],
fUX, fUY, fUZ, fUC, fVX, fVY, fVZ, fVC);
// The -0.5f shifts from corner to center of detector pixels
fU = (fUX*fX + fUY*fY + fUZ*fZ + fUC) - 0.5f;
fV = (fVX*fX + fVY*fY + fVZ*fZ + fVC) - 0.5f;
}
//----------------------------------------------------------------------------------------
bool CParallelVecProjectionGeometry3D::_check()
{
// TODO
return true;
}
} // end namespace astra