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Diffstat (limited to 'README.txt')
| -rw-r--r-- | README.txt | 14 |
1 files changed, 10 insertions, 4 deletions
@@ -49,17 +49,20 @@ Add the mex and tools subdirectories to your matlab path. Linux, from source: -------------------- -Requirements: g++, boost, CUDA (driver+toolkit), matlab +Requirements: g++, boost, CUDA (driver+toolkit), Matlab and/or Python (2.7 or 3.x) cd build/linux +./autogen.sh # when building a git version ./configure --with-cuda=/usr/local/cuda \ --with-matlab=/usr/local/MATLAB/R2012a \ + --with-python \ --prefix=/usr/local/astra make make install Add /usr/local/astra/lib to your LD_LIBRARY_PATH. Add /usr/local/astra/matlab and its subdirectories (tools, mex) to your matlab path. +Add /usr/local/astra/python to your PYTHONPATH. NB: Each matlab version only supports a specific range of g++ versions. @@ -90,11 +93,14 @@ Install by copying AstraCuda32.dll or AstraCuda64.dll from bin/ and References: ------------ -If you use parallel beam GPU code for your research, we would appreciate it if -you would refer to the following paper: +If you use the ASTRA Toolbox for your research, we would appreciate it if you would refer to the following paper: + +W. van Aarle, W. J. Palenstijn, J. De Beenhouwer, T. Altantzis, S. Bals, K J. Batenburg, and J. Sijbers, "The ASTRA Toolbox: A platform for advanced algorithm development in electron tomography", Ultramicroscopy (2015), http://dx.doi.org/10.1016/j.ultramic.2015.05.002 + +Additionally, if you use parallel beam GPU code, we would appreciate it if you would refer to the following paper: W. J. Palenstijn, K J. Batenburg, and J. Sijbers, "Performance improvements for iterative electron tomography reconstruction using graphics processing units (GPUs)", Journal of Structural Biology, vol. 176, issue 2, pp. 250-253, -2011 +2011, http://dx.doi.org/10.1016/j.jsb.2011.07.017 |