diff options
Diffstat (limited to 'src')
| -rw-r--r-- | src/ConvexHullAlgorithm.cpp | 239 | ||||
| -rw-r--r-- | src/CudaDataOperationAlgorithm.cpp | 1 |
2 files changed, 0 insertions, 240 deletions
diff --git a/src/ConvexHullAlgorithm.cpp b/src/ConvexHullAlgorithm.cpp deleted file mode 100644 index e769420..0000000 --- a/src/ConvexHullAlgorithm.cpp +++ /dev/null @@ -1,239 +0,0 @@ -/* ------------------------------------------------------------------------ -Copyright 2012 iMinds-Vision Lab, University of Antwerp - -Contact: astra@ua.ac.be -Website: http://astra.ua.ac.be - - -This file is part of the -All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). - -The ASTRA Toolbox is free software: you can redistribute it and/or modify -it under the terms of the GNU General Public License as published by -the Free Software Foundation, either version 3 of the License, or -(at your option) any later version. - -The ASTRA Toolbox is distributed in the hope that it will be useful, -but WITHOUT ANY WARRANTY; without even the implied warranty of -MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -GNU General Public License for more details. - -You should have received a copy of the GNU General Public License -along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. - ------------------------------------------------------------------------ -$Id$ -*/ - -#include "astra/ConvexHullAlgorithm.h" - -#include <boost/lexical_cast.hpp> - -#include "astra/AstraObjectManager.h" -#include "astra/DataProjectorPolicies.h" - -using namespace std; - -namespace astra { - -#include "astra/Projector2DImpl.inl" - -// type of the algorithm, needed to register with CAlgorithmFactory -std::string CConvexHullAlgorithm::type = "ConvexHull"; - -//---------------------------------------------------------------------------------------- -// Constructor -CConvexHullAlgorithm::CConvexHullAlgorithm() -{ - _clear(); -} - -//--------------------------------------------------------------------------------------- -// Initialize - C++ -CConvexHullAlgorithm::CConvexHullAlgorithm(CProjector2D* _pProjector, - CFloat32ProjectionData2D* _pSinogram, - CFloat32VolumeData2D* _pReconstructionMask) -{ - _clear(); - initialize(_pProjector, _pSinogram, _pReconstructionMask); -} - -//---------------------------------------------------------------------------------------- -// Destructor -CConvexHullAlgorithm::~CConvexHullAlgorithm() -{ - clear(); -} - -//--------------------------------------------------------------------------------------- -// Clear - Constructors -void CConvexHullAlgorithm::_clear() -{ - m_bIsInitialized = false; - - m_pProjectionPixelWeight = NULL; - m_pReconstructionMask = NULL; - m_pSinogram = NULL; - - m_pProjector = NULL; - m_pDataProjector = NULL; -} - -//--------------------------------------------------------------------------------------- -// Clear - Public -void CConvexHullAlgorithm::clear() -{ - m_bIsInitialized = false; - - ASTRA_DELETE(m_pProjectionPixelWeight); - m_pReconstructionMask = NULL; - m_pSinogram = NULL; - - m_pProjector = NULL; - ASTRA_DELETE(m_pDataProjector); -} - -//---------------------------------------------------------------------------------------- -// Check -bool CConvexHullAlgorithm::_check() -{ - ASTRA_CONFIG_CHECK(m_pReconstructionMask, "ConvexHull", "Invalid ReconstructionMask Object"); - ASTRA_CONFIG_CHECK(m_pReconstructionMask->isInitialized(), "ConvexHull", "Invalid ReconstructionMask Object"); - ASTRA_CONFIG_CHECK(m_pProjectionPixelWeight, "ConvexHull", "Invalid ProjectionPixelWeight Object"); - ASTRA_CONFIG_CHECK(m_pProjectionPixelWeight->isInitialized(), "ConvexHull", "Invalid ProjectionPixelWeight Object"); - ASTRA_CONFIG_CHECK(m_pSinogram, "ConvexHull", "Invalid Sinogram Object"); - ASTRA_CONFIG_CHECK(m_pSinogram->isInitialized(), "ConvexHull", "Invalid Sinogram Object"); - - ASTRA_CONFIG_CHECK(m_pDataProjector, "ConvexHull", "Invalid Data Projector Policy"); - ASTRA_CONFIG_CHECK(m_pProjector, "ConvexHull", "Invalid Projector Object"); - ASTRA_CONFIG_CHECK(m_pProjector->isInitialized(), "ConvexHull", "Invalid Projector Object"); - - return true; -} - -//--------------------------------------------------------------------------------------- -// Initialize - Config -bool CConvexHullAlgorithm::initialize(const Config& _cfg) -{ - ASTRA_ASSERT(_cfg.self); - - // if already initialized, clear first - if (m_bIsInitialized) { - clear(); - } - - // projector - XMLNode* node = _cfg.self->getSingleNode("ProjectorId"); - ASTRA_CONFIG_CHECK(node, "ConvexHull", "No ProjectorId tag specified."); - int id = boost::lexical_cast<int>(node->getContent()); - m_pProjector = CProjector2DManager::getSingleton().get(id); - ASTRA_DELETE(node); - - // sinogram data - node = _cfg.self->getSingleNode("ProjectionDataId"); - ASTRA_CONFIG_CHECK(node, "ConvexHull", "No ProjectionDataId tag specified."); - id = boost::lexical_cast<int>(node->getContent()); - m_pSinogram = dynamic_cast<CFloat32ProjectionData2D*>(CData2DManager::getSingleton().get(id)); - ASTRA_DELETE(node); - - // reconstruction mask - node = _cfg.self->getSingleNode("ConvexHullDataId"); - ASTRA_CONFIG_CHECK(node, "ConvexHull", "No ReconstructionDataId tag specified."); - id = boost::lexical_cast<int>(node->getContent()); - m_pReconstructionMask = dynamic_cast<CFloat32VolumeData2D*>(CData2DManager::getSingleton().get(id)); - ASTRA_DELETE(node); - - // init data objects and data projectors - _init(); - - // success - m_bIsInitialized = _check(); - return m_bIsInitialized; -} - -//--------------------------------------------------------------------------------------- -// Initialize - C++ -bool CConvexHullAlgorithm::initialize(CProjector2D* _pProjector, - CFloat32ProjectionData2D* _pSinogram, - CFloat32VolumeData2D* _pReconstructionMask) -{ - // if already initialized, clear first - if (m_bIsInitialized) { - clear(); - } - - // required classes - m_pProjector = _pProjector; - m_pSinogram = _pSinogram; - m_pReconstructionMask = _pReconstructionMask; - - // init data objects and data projectors - _init(); - - // success - m_bIsInitialized = _check(); - return m_bIsInitialized; -} - -//--------------------------------------------------------------------------------------- -// Initialize Data Projectors - private -void CConvexHullAlgorithm::_init() -{ - // create data objects - m_pProjectionPixelWeight = new CFloat32VolumeData2D(m_pProjector->getVolumeGeometry()); - m_pProjectionPixelWeight->setData(0); - - // forward projection data projector - m_pDataProjector = dispatchDataProjector( - m_pProjector, - //SinogramMaskPolicy(m_pSinogramMask), // sinogram mask - TotalPixelWeightBySinogramPolicy(m_pSinogram, m_pProjectionPixelWeight) // pixel weight * sinogram - ); -} - -//--------------------------------------------------------------------------------------- -// Information - All -map<string,boost::any> CConvexHullAlgorithm::getInformation() -{ - map<string, boost::any> res; - return mergeMap<string,boost::any>(CAlgorithm::getInformation(), res); -}; - -//--------------------------------------------------------------------------------------- -// Information - Specific -boost::any CConvexHullAlgorithm::getInformation(std::string _sIdentifier) -{ - return CAlgorithm::getInformation(_sIdentifier); -}; - -//---------------------------------------------------------------------------------------- -// Iterate -void CConvexHullAlgorithm::run(int _iNrIterations) -{ - // check initialized - ASTRA_ASSERT(m_bIsInitialized); - - m_pReconstructionMask->setData(1.0f); - - // loop angles - for (int iProjection = 0; iProjection < m_pProjector->getProjectionGeometry()->getProjectionAngleCount(); ++iProjection) { - - m_pProjectionPixelWeight->setData(0.0f); - - // project - m_pDataProjector->projectSingleProjection(iProjection); - - // loop values and set to zero - for (int iPixel = 0; iPixel < m_pReconstructionMask->getSize(); ++iPixel) { - if (m_pProjectionPixelWeight->getData()[iPixel] == 0) { - m_pReconstructionMask->getData()[iPixel] = 0; - } - } - - } - -} -//---------------------------------------------------------------------------------------- - -} // namespace astra diff --git a/src/CudaDataOperationAlgorithm.cpp b/src/CudaDataOperationAlgorithm.cpp index dcb6c3c..5e15dc8 100644 --- a/src/CudaDataOperationAlgorithm.cpp +++ b/src/CudaDataOperationAlgorithm.cpp @@ -30,7 +30,6 @@ $Id$ #include "astra/CudaDataOperationAlgorithm.h" -#include "../cuda/2d/dataop.h" #include "../cuda/2d/algo.h" #include "../cuda/2d/darthelper.h" #include "../cuda/2d/arith.h" |