/* ----------------------------------------------------------------------- Copyright: 2010-2018, imec Vision Lab, University of Antwerp 2014-2018, CWI, Amsterdam Contact: astra@astra-toolbox.com Website: http://www.astra-toolbox.com/ This file is part of the ASTRA Toolbox. The ASTRA Toolbox is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. The ASTRA Toolbox is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with the ASTRA Toolbox. If not, see . ----------------------------------------------------------------------- */ #include "astra/cuda/2d/util.h" #include "astra/cuda/2d/arith.h" #include #include #include typedef texture texture2D; static texture2D gT_FanProjTexture; namespace astraCUDA { const unsigned int g_anglesPerBlock = 16; const unsigned int g_blockSliceSize = 32; const unsigned int g_blockSlices = 16; const unsigned int g_MaxAngles = 2560; struct DevFanParams { float fNumC; float fNumX; float fNumY; float fDenC; float fDenX; float fDenY; }; __constant__ DevFanParams gC_C[g_MaxAngles]; static bool bindProjDataTexture(float* data, unsigned int pitch, unsigned int width, unsigned int height, cudaTextureAddressMode mode = cudaAddressModeBorder) { cudaChannelFormatDesc channelDesc = cudaCreateChannelDesc(); gT_FanProjTexture.addressMode[0] = mode; gT_FanProjTexture.addressMode[1] = mode; gT_FanProjTexture.filterMode = cudaFilterModeLinear; gT_FanProjTexture.normalized = false; cudaBindTexture2D(0, gT_FanProjTexture, (const void*)data, channelDesc, width, height, sizeof(float)*pitch); // TODO: error value? return true; } template __global__ void devFanBP(float* D_volData, unsigned int volPitch, unsigned int startAngle, const SDimensions dims, float fOutputScale) { const int relX = threadIdx.x; const int relY = threadIdx.y; int endAngle = startAngle + g_anglesPerBlock; if (endAngle > dims.iProjAngles) endAngle = dims.iProjAngles; const int X = blockIdx.x * g_blockSlices + relX; const int Y = blockIdx.y * g_blockSliceSize + relY; if (X >= dims.iVolWidth || Y >= dims.iVolHeight) return; const float fX = ( X - 0.5f*dims.iVolWidth + 0.5f ); const float fY = - ( Y - 0.5f*dims.iVolHeight + 0.5f ); float* volData = (float*)D_volData; float fVal = 0.0f; float fA = startAngle + 0.5f; for (int angle = startAngle; angle < endAngle; ++angle) { const float fNumC = gC_C[angle].fNumC; const float fNumX = gC_C[angle].fNumX; const float fNumY = gC_C[angle].fNumY; const float fDenX = gC_C[angle].fDenX; const float fDenY = gC_C[angle].fDenY; const float fNum = fNumC + fNumX * fX + fNumY * fY; const float fDen = (FBPWEIGHT ? 1.0 : gC_C[angle].fDenC) + fDenX * fX + fDenY * fY; // Scale factor is the approximate number of rays traversing this pixel, // given by the inverse size of a detector pixel scaled by the magnification // factor of this pixel. // Magnification factor is || u (d-s) || / || u (x-s) || const float fr = __fdividef(1.0f, fDen); const float fT = fNum * fr; fVal += tex2D(gT_FanProjTexture, fT, fA) * (FBPWEIGHT ? fr * fr : fr); fA += 1.0f; } volData[Y*volPitch+X] += fVal * fOutputScale; } // supersampling version __global__ void devFanBP_SS(float* D_volData, unsigned int volPitch, unsigned int startAngle, const SDimensions dims, float fOutputScale) { const int relX = threadIdx.x; const int relY = threadIdx.y; int endAngle = startAngle + g_anglesPerBlock; if (endAngle > dims.iProjAngles) endAngle = dims.iProjAngles; const int X = blockIdx.x * g_blockSlices + relX; const int Y = blockIdx.y * g_blockSliceSize + relY; if (X >= dims.iVolWidth || Y >= dims.iVolHeight) return; const float fXb = ( X - 0.5f*dims.iVolWidth + 0.5f - 0.5f + 0.5f/dims.iRaysPerPixelDim); const float fYb = - ( Y - 0.5f*dims.iVolHeight + 0.5f - 0.5f + 0.5f/dims.iRaysPerPixelDim); const float fSubStep = 1.0f/dims.iRaysPerPixelDim; float* volData = (float*)D_volData; fOutputScale /= (dims.iRaysPerPixelDim * dims.iRaysPerPixelDim); float fVal = 0.0f; float fA = startAngle + 0.5f; for (int angle = startAngle; angle < endAngle; ++angle) { const float fNumC = gC_C[angle].fNumC; const float fNumX = gC_C[angle].fNumX; const float fNumY = gC_C[angle].fNumY; const float fDenC = gC_C[angle].fDenC; const float fDenX = gC_C[angle].fDenX; const float fDenY = gC_C[angle].fDenY; // TODO: Optimize these loops... float fX = fXb; for (int iSubX = 0; iSubX < dims.iRaysPerPixelDim; ++iSubX) { float fY = fYb; for (int iSubY = 0; iSubY < dims.iRaysPerPixelDim; ++iSubY) { const float fNum = fNumC + fNumX * fX + fNumY * fY; const float fDen = fDenC + fDenX * fX + fDenY * fY; const float fr = __fdividef(1.0f, fDen); const float fT = fNum * fr; fVal += tex2D(gT_FanProjTexture, fT, fA) * fr; fY -= fSubStep; } fX += fSubStep; } fA += 1.0f; } volData[Y*volPitch+X] += fVal * fOutputScale; } // BP specifically for SART. // It includes (free) weighting with voxel weight. // It assumes the proj texture is set up _without_ padding, unlike regular BP. __global__ void devFanBP_SART(float* D_volData, unsigned int volPitch, const SDimensions dims, float fOutputScale) { const int relX = threadIdx.x; const int relY = threadIdx.y; const int X = blockIdx.x * g_blockSlices + relX; const int Y = blockIdx.y * g_blockSliceSize + relY; if (X >= dims.iVolWidth || Y >= dims.iVolHeight) return; const float fX = ( X - 0.5f*dims.iVolWidth + 0.5f ); const float fY = - ( Y - 0.5f*dims.iVolHeight + 0.5f ); float* volData = (float*)D_volData; const float fNumC = gC_C[0].fNumC; const float fNumX = gC_C[0].fNumX; const float fNumY = gC_C[0].fNumY; const float fDenC = gC_C[0].fDenC; const float fDenX = gC_C[0].fDenX; const float fDenY = gC_C[0].fDenY; const float fNum = fNumC + fNumX * fX + fNumY * fY; const float fDen = fDenC + fDenX * fX + fDenY * fY; const float fr = __fdividef(1.0f, fDen); const float fT = fNum * fr; // NB: The scale constant in devBP is cancelled out by the SART weighting const float fVal = tex2D(gT_FanProjTexture, fT, 0.5f); volData[Y*volPitch+X] += fVal * fOutputScale; } struct Vec2 { double x; double y; Vec2(double x_, double y_) : x(x_), y(y_) { } Vec2 operator+(const Vec2 &b) const { return Vec2(x + b.x, y + b.y); } Vec2 operator-(const Vec2 &b) const { return Vec2(x - b.x, y - b.y); } Vec2 operator-() const { return Vec2(-x, -y); } double norm() const { return sqrt(x*x + y*y); } }; double det2(const Vec2 &a, const Vec2 &b) { return a.x * b.y - a.y * b.x; } bool transferConstants(const SFanProjection* angles, unsigned int iProjAngles, bool FBP) { DevFanParams *p = new DevFanParams[iProjAngles]; // We need three values in the kernel: // projected coordinates of pixels on the detector: // || x (s-d) || + ||s d|| / || u (s-x) || // ray density weighting factor for the adjoint // || u (s-d) || / ( |u| * || u (s-x) || ) // fan-beam FBP weighting factor // ( || u s || / || u (s-x) || ) ^ 2 for (unsigned int i = 0; i < iProjAngles; ++i) { Vec2 u(angles[i].fDetUX, angles[i].fDetUY); Vec2 s(angles[i].fSrcX, angles[i].fSrcY); Vec2 d(angles[i].fDetSX, angles[i].fDetSY); double fScale; if (!FBP) { // goal: 1/fDen = || u (s-d) || / ( |u| * || u (s-x) || ) // fDen = ( |u| * || u (s-x) || ) / || u (s-d) || // i.e. scale = |u| / || u (s-d) || fScale = u.norm() / det2(u, s-d); } else { // goal: 1/fDen = || u s || / || u (s-x) || // fDen = || u (s-x) || / || u s || // i.e., scale = 1 / || u s || fScale = 1.0 / det2(u, s); } p[i].fNumC = fScale * det2(s,d); p[i].fNumX = fScale * (s-d).y; p[i].fNumY = -fScale * (s-d).x; p[i].fDenC = fScale * det2(u, s); // == 1.0 for FBP p[i].fDenX = fScale * u.y; p[i].fDenY = -fScale * u.x; } // TODO: Check for errors cudaMemcpyToSymbol(gC_C, p, iProjAngles*sizeof(DevFanParams), 0, cudaMemcpyHostToDevice); return true; } bool FanBP_internal(float* D_volumeData, unsigned int volumePitch, float* D_projData, unsigned int projPitch, const SDimensions& dims, const SFanProjection* angles, float fOutputScale) { assert(dims.iProjAngles <= g_MaxAngles); bindProjDataTexture(D_projData, projPitch, dims.iProjDets, dims.iProjAngles); bool ok = transferConstants(angles, dims.iProjAngles, false); if (!ok) return false; dim3 dimBlock(g_blockSlices, g_blockSliceSize); dim3 dimGrid((dims.iVolWidth+g_blockSlices-1)/g_blockSlices, (dims.iVolHeight+g_blockSliceSize-1)/g_blockSliceSize); cudaStream_t stream; cudaStreamCreate(&stream); for (unsigned int i = 0; i < dims.iProjAngles; i += g_anglesPerBlock) { if (dims.iRaysPerPixelDim > 1) devFanBP_SS<<>>(D_volumeData, volumePitch, i, dims, fOutputScale); else devFanBP<<>>(D_volumeData, volumePitch, i, dims, fOutputScale); } cudaThreadSynchronize(); cudaTextForceKernelsCompletion(); cudaStreamDestroy(stream); return true; } bool FanBP_FBPWeighted_internal(float* D_volumeData, unsigned int volumePitch, float* D_projData, unsigned int projPitch, const SDimensions& dims, const SFanProjection* angles, float fOutputScale) { assert(dims.iProjAngles <= g_MaxAngles); bindProjDataTexture(D_projData, projPitch, dims.iProjDets, dims.iProjAngles); bool ok = transferConstants(angles, dims.iProjAngles, true); if (!ok) return false; dim3 dimBlock(g_blockSlices, g_blockSliceSize); dim3 dimGrid((dims.iVolWidth+g_blockSlices-1)/g_blockSlices, (dims.iVolHeight+g_blockSliceSize-1)/g_blockSliceSize); cudaStream_t stream; cudaStreamCreate(&stream); for (unsigned int i = 0; i < dims.iProjAngles; i += g_anglesPerBlock) { devFanBP<<>>(D_volumeData, volumePitch, i, dims, fOutputScale); } cudaThreadSynchronize(); cudaTextForceKernelsCompletion(); cudaStreamDestroy(stream); return true; } // D_projData is a pointer to one padded sinogram line bool FanBP_SART(float* D_volumeData, unsigned int volumePitch, float* D_projData, unsigned int projPitch, unsigned int angle, const SDimensions& dims, const SFanProjection* angles, float fOutputScale) { // only one angle bindProjDataTexture(D_projData, projPitch, dims.iProjDets, 1, cudaAddressModeClamp); bool ok = transferConstants(angles + angle, 1, false); if (!ok) return false; dim3 dimBlock(g_blockSlices, g_blockSliceSize); dim3 dimGrid((dims.iVolWidth+g_blockSlices-1)/g_blockSlices, (dims.iVolHeight+g_blockSliceSize-1)/g_blockSliceSize); devFanBP_SART<<>>(D_volumeData, volumePitch, dims, fOutputScale); cudaThreadSynchronize(); cudaTextForceKernelsCompletion(); return true; } bool FanBP(float* D_volumeData, unsigned int volumePitch, float* D_projData, unsigned int projPitch, const SDimensions& dims, const SFanProjection* angles, float fOutputScale) { for (unsigned int iAngle = 0; iAngle < dims.iProjAngles; iAngle += g_MaxAngles) { SDimensions subdims = dims; unsigned int iEndAngle = iAngle + g_MaxAngles; if (iEndAngle >= dims.iProjAngles) iEndAngle = dims.iProjAngles; subdims.iProjAngles = iEndAngle - iAngle; bool ret; ret = FanBP_internal(D_volumeData, volumePitch, D_projData + iAngle * projPitch, projPitch, subdims, angles + iAngle, fOutputScale); if (!ret) return false; } return true; } bool FanBP_FBPWeighted(float* D_volumeData, unsigned int volumePitch, float* D_projData, unsigned int projPitch, const SDimensions& dims, const SFanProjection* angles, float fOutputScale) { for (unsigned int iAngle = 0; iAngle < dims.iProjAngles; iAngle += g_MaxAngles) { SDimensions subdims = dims; unsigned int iEndAngle = iAngle + g_MaxAngles; if (iEndAngle >= dims.iProjAngles) iEndAngle = dims.iProjAngles; subdims.iProjAngles = iEndAngle - iAngle; bool ret; ret = FanBP_FBPWeighted_internal(D_volumeData, volumePitch, D_projData + iAngle * projPitch, projPitch, subdims, angles + iAngle, fOutputScale); if (!ret) return false; } return true; } }