diff options
Diffstat (limited to 'Wrappers/Python/src')
-rw-r--r-- | Wrappers/Python/src/cpu_regularisers.pyx | 58 | ||||
-rw-r--r-- | Wrappers/Python/src/gpu_regularisers.pyx | 75 |
2 files changed, 133 insertions, 0 deletions
diff --git a/Wrappers/Python/src/cpu_regularisers.pyx b/Wrappers/Python/src/cpu_regularisers.pyx index 1661375..b8d2523 100644 --- a/Wrappers/Python/src/cpu_regularisers.pyx +++ b/Wrappers/Python/src/cpu_regularisers.pyx @@ -20,6 +20,7 @@ cimport numpy as np cdef extern float TV_ROF_CPU_main(float *Input, float *Output, float lambdaPar, int iterationsNumb, float tau, int dimX, int dimY, int dimZ); cdef extern float TV_FGP_CPU_main(float *Input, float *Output, float lambdaPar, int iterationsNumb, float epsil, int methodTV, int nonneg, int printM, int dimX, int dimY, int dimZ); +cdef extern float TV_SB_CPU_main(float *Input, float *Output, float lambdaPar, int iterationsNumb, float epsil, int methodTV, int printM, int dimX, int dimY, int dimZ); cdef extern float dTV_FGP_CPU_main(float *Input, float *InputRef, float *Output, float lambdaPar, int iterationsNumb, float epsil, float eta, int methodTV, int nonneg, int printM, int dimX, int dimY, int dimZ); @@ -125,6 +126,63 @@ def TV_FGP_3D(np.ndarray[np.float32_t, ndim=3, mode="c"] inputData, printM, dims[2], dims[1], dims[0]) return outputData + +#***************************************************************# +#********************** Total-variation SB *********************# +#***************************************************************# +#*************** Total-variation Split Bregman (SB)*************# +def TV_SB_CPU(inputData, regularisation_parameter, iterationsNumb, tolerance_param, methodTV, printM): + if inputData.ndim == 2: + return TV_SB_2D(inputData, regularisation_parameter, iterationsNumb, tolerance_param, methodTV, printM) + elif inputData.ndim == 3: + return TV_SB_3D(inputData, regularisation_parameter, iterationsNumb, tolerance_param, methodTV, printM) + +def TV_SB_2D(np.ndarray[np.float32_t, ndim=2, mode="c"] inputData, + float regularisation_parameter, + int iterationsNumb, + float tolerance_param, + int methodTV, + int printM): + + cdef long dims[2] + dims[0] = inputData.shape[0] + dims[1] = inputData.shape[1] + + cdef np.ndarray[np.float32_t, ndim=2, mode="c"] outputData = \ + np.zeros([dims[0],dims[1]], dtype='float32') + + #/* Run SB-TV iterations for 2D data */ + TV_SB_CPU_main(&inputData[0,0], &outputData[0,0], regularisation_parameter, + iterationsNumb, + tolerance_param, + methodTV, + printM, + dims[0], dims[1], 1) + + return outputData + +def TV_SB_3D(np.ndarray[np.float32_t, ndim=3, mode="c"] inputData, + float regularisation_parameter, + int iterationsNumb, + float tolerance_param, + int methodTV, + int printM): + cdef long dims[3] + dims[0] = inputData.shape[0] + dims[1] = inputData.shape[1] + dims[2] = inputData.shape[2] + + cdef np.ndarray[np.float32_t, ndim=3, mode="c"] outputData = \ + np.zeros([dims[0], dims[1], dims[2]], dtype='float32') + + #/* Run SB-TV iterations for 3D data */ + TV_SB_CPU_main(&inputData[0,0,0], &outputData[0,0,0], regularisation_parameter, + iterationsNumb, + tolerance_param, + methodTV, + printM, + dims[2], dims[1], dims[0]) + return outputData #****************************************************************# #**************Directional Total-variation FGP ******************# #****************************************************************# diff --git a/Wrappers/Python/src/gpu_regularisers.pyx b/Wrappers/Python/src/gpu_regularisers.pyx index 18efdcd..36eec95 100644 --- a/Wrappers/Python/src/gpu_regularisers.pyx +++ b/Wrappers/Python/src/gpu_regularisers.pyx @@ -20,6 +20,7 @@ cimport numpy as np cdef extern void TV_ROF_GPU_main(float* Input, float* Output, float lambdaPar, int iter, float tau, int N, int M, int Z); cdef extern void TV_FGP_GPU_main(float *Input, float *Output, float lambdaPar, int iter, float epsil, int methodTV, int nonneg, int printM, int N, int M, int Z); +cdef extern void TV_SB_GPU_main(float *Input, float *Output, float lambdaPar, int iter, float epsil, int methodTV, int printM, int N, int M, int Z); cdef extern void dTV_FGP_GPU_main(float *Input, float *InputRef, float *Output, float lambdaPar, int iterationsNumb, float epsil, float eta, int methodTV, int nonneg, int printM, int N, int M, int Z); # Total-variation Rudin-Osher-Fatemi (ROF) @@ -62,6 +63,27 @@ def TV_FGP_GPU(inputData, methodTV, nonneg, printM) +# Total-variation Split Bregman (SB) +def TV_SB_GPU(inputData, + regularisation_parameter, + iterations, + tolerance_param, + methodTV, + printM): + if inputData.ndim == 2: + return SBTV2D(inputData, + regularisation_parameter, + iterations, + tolerance_param, + methodTV, + printM) + elif inputData.ndim == 3: + return SBTV3D(inputData, + regularisation_parameter, + iterations, + tolerance_param, + methodTV, + printM) # Directional Total-variation Fast-Gradient-Projection (FGP) def dTV_FGP_GPU(inputData, refdata, @@ -197,7 +219,60 @@ def FGPTV3D(np.ndarray[np.float32_t, ndim=3, mode="c"] inputData, dims[2], dims[1], dims[0]); return outputData +#***************************************************************# +#********************** Total-variation SB *********************# +#***************************************************************# +#*************** Total-variation Split Bregman (SB)*************# +def SBTV2D(np.ndarray[np.float32_t, ndim=2, mode="c"] inputData, + float regularisation_parameter, + int iterations, + float tolerance_param, + int methodTV, + int printM): + + cdef long dims[2] + dims[0] = inputData.shape[0] + dims[1] = inputData.shape[1] + + cdef np.ndarray[np.float32_t, ndim=2, mode="c"] outputData = \ + np.zeros([dims[0],dims[1]], dtype='float32') + + # Running CUDA code here + TV_SB_GPU_main(&inputData[0,0], &outputData[0,0], + regularisation_parameter, + iterations, + tolerance_param, + methodTV, + printM, + dims[0], dims[1], 1); + + return outputData +def SBTV3D(np.ndarray[np.float32_t, ndim=3, mode="c"] inputData, + float regularisation_parameter, + int iterations, + float tolerance_param, + int methodTV, + int printM): + + cdef long dims[3] + dims[0] = inputData.shape[0] + dims[1] = inputData.shape[1] + dims[2] = inputData.shape[2] + + cdef np.ndarray[np.float32_t, ndim=3, mode="c"] outputData = \ + np.zeros([dims[0],dims[1],dims[2]], dtype='float32') + + # Running CUDA code here + TV_SB_GPU_main(&inputData[0,0,0], &outputData[0,0,0], + regularisation_parameter , + iterations, + tolerance_param, + methodTV, + printM, + dims[2], dims[1], dims[0]); + + return outputData #****************************************************************# #**************Directional Total-variation FGP ******************# #****************************************************************# |