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-rw-r--r--Wrappers/Python/conda-recipe/bld.bat7
-rw-r--r--Wrappers/Python/conda-recipe/build.sh6
-rw-r--r--Wrappers/Python/conda-recipe/meta.yaml1
-rw-r--r--Wrappers/Python/setup-regularizers.py.in (renamed from Wrappers/Python/setup.py)38
-rw-r--r--Wrappers/Python/src/cpu_regularizers.pyx19
-rw-r--r--Wrappers/Python/src/fista_module.cpp4
-rw-r--r--Wrappers/Python/test/test_cpu_regularizers.py5
7 files changed, 45 insertions, 35 deletions
diff --git a/Wrappers/Python/conda-recipe/bld.bat b/Wrappers/Python/conda-recipe/bld.bat
index fe3ddae..850905c 100644
--- a/Wrappers/Python/conda-recipe/bld.bat
+++ b/Wrappers/Python/conda-recipe/bld.bat
@@ -8,7 +8,10 @@ ROBOCOPY /E "%RECIPE_DIR%\..\.." "%SRC_DIR%\ccpi"
ROBOCOPY /E "%RECIPE_DIR%\..\..\..\Core" "%SRC_DIR%\Core"
cd %SRC_DIR%\ccpi\Python
-%PYTHON% setup.py build_ext
+:: issue cmake to create setup.py
+cmake .
+
+%PYTHON% setup-regularizers.py build_ext
if errorlevel 1 exit 1
-%PYTHON% setup.py install
+%PYTHON% setup-regularizers.py install
if errorlevel 1 exit 1
diff --git a/Wrappers/Python/conda-recipe/build.sh b/Wrappers/Python/conda-recipe/build.sh
index aaf9a69..9ea4161 100644
--- a/Wrappers/Python/conda-recipe/build.sh
+++ b/Wrappers/Python/conda-recipe/build.sh
@@ -11,7 +11,9 @@ cd $SRC_DIR/ccpi/Python
echo "$SRC_DIR/ccpi/Python"
-$PYTHON setup.py build_ext
-$PYTHON setup.py install
+cmake .
+
+$PYTHON setup-regularizers.py build_ext
+$PYTHON setup-regularizers.py install
diff --git a/Wrappers/Python/conda-recipe/meta.yaml b/Wrappers/Python/conda-recipe/meta.yaml
index c451b37..8b58738 100644
--- a/Wrappers/Python/conda-recipe/meta.yaml
+++ b/Wrappers/Python/conda-recipe/meta.yaml
@@ -21,6 +21,7 @@ requirements:
- cil_regularizer
- vc 14 # [win and py35]
- vc 9 # [win and py27]
+ - cmake
run:
- python ==2.7 # [py27]
diff --git a/Wrappers/Python/setup.py b/Wrappers/Python/setup-regularizers.py.in
index 00c93fc..3f4d2d7 100644
--- a/Wrappers/Python/setup.py
+++ b/Wrappers/Python/setup-regularizers.py.in
@@ -33,35 +33,26 @@ extra_link_args = []
extra_libraries = ['cilreg']
extra_include_dirs += [os.path.join(".." , ".." , "Core"),
- os.path.join(".." , ".." , "Core", "regularizers_CPU"),
+ os.path.join(".." , ".." , "Core", "regularizers_CPU"),
os.path.join(".." , ".." , "Core", "regularizers_GPU") ,
"."]
-if platform.system() == 'Windows':
-
-
+if platform.system() == 'Windows':
extra_compile_args[0:] = ['/DWIN32','/EHsc','/DBOOST_ALL_NO_LIB' , '/openmp' ]
-
- if sys.version_info.major == 3 :
- extra_libraries += ['boost_python3-vc140-mt-1_64', 'boost_numpy3-vc140-mt-1_64']
- else:
- extra_libraries += ['boost_python-vc90-mt-1_64', 'boost_numpy-vc90-mt-1_64']
else:
extra_compile_args = ['-fopenmp','-O2', '-funsigned-char', '-Wall', '-std=c++0x']
- if sys.version_info.major == 3:
- extra_libraries += ['boost_python3', 'boost_numpy3','gomp']
- else:
- extra_libraries += ['boost_python', 'boost_numpy','gomp']
+ extra_libraries += [@EXTRA_OMP_LIB@]
+
+extra_libraries += ["@BOOST_PYTHON_LIB@", "@BOOST_NUMPY_LIB@"]
+
setup(
name='ccpi',
description='CCPi Core Imaging Library - Image Regularizers',
version=cil_version,
cmdclass = {'build_ext': build_ext},
- ext_modules = [Extension("ccpi.filters.gpu_regularizers",
- sources=[
- os.path.join("." , "src", "gpu_regularizers.pyx" ),
- ],
+ ext_modules = [Extension("ccpi.filters.cpu_regularizers_boost",
+ sources=[os.path.join("." , "src", "fista_module.cpp" )],
include_dirs=extra_include_dirs,
library_dirs=extra_library_dirs,
extra_compile_args=extra_compile_args,
@@ -77,16 +68,8 @@ setup(
description='CCPi Core Imaging Library - Image Regularizers',
version=cil_version,
cmdclass = {'build_ext': build_ext},
- ext_modules = [Extension("ccpi.filters.cpu_regularizers",
- sources=[os.path.join("." , "src", "fista_module.cpp" ),
- os.path.join("." , "src", "cpu_regularizers.pyx" )
- # os.path.join("@CMAKE_SOURCE_DIR@" , "main_func" , "regularizers_CPU", "FGP_TV_core.c"),
- # os.path.join("@CMAKE_SOURCE_DIR@" , "main_func" , "regularizers_CPU", "SplitBregman_TV_core.c"),
- # os.path.join("@CMAKE_SOURCE_DIR@" , "main_func" , "regularizers_CPU", "LLT_model_core.c"),
- # os.path.join("@CMAKE_SOURCE_DIR@" , "main_func" , "regularizers_CPU", "PatchBased_Regul_core.c"),
- # os.path.join("@CMAKE_SOURCE_DIR@" , "main_func" , "regularizers_CPU", "TGV_PD_core.c"),
- # os.path.join("@CMAKE_SOURCE_DIR@" , "main_func" , "regularizers_CPU", "utils.c")
- ],
+ ext_modules = [Extension("ccpi.filters.cpu_regularizers_cython",
+ sources=[os.path.join("." , "src", "cpu_regularizers.pyx" ) ],
include_dirs=extra_include_dirs,
library_dirs=extra_library_dirs,
extra_compile_args=extra_compile_args,
@@ -98,3 +81,4 @@ setup(
)
+@SETUP_GPU_WRAPPERS@ \ No newline at end of file
diff --git a/Wrappers/Python/src/cpu_regularizers.pyx b/Wrappers/Python/src/cpu_regularizers.pyx
index e69de29..a8f8c8f 100644
--- a/Wrappers/Python/src/cpu_regularizers.pyx
+++ b/Wrappers/Python/src/cpu_regularizers.pyx
@@ -0,0 +1,19 @@
+# distutils: language=c++
+"""
+Copyright 2018 CCPi
+Licensed under the Apache License, Version 2.0 (the "License");
+you may not use this file except in compliance with the License.
+You may obtain a copy of the License at
+ http://www.apache.org/licenses/LICENSE-2.0
+Unless required by applicable law or agreed to in writing, software
+distributed under the License is distributed on an "AS IS" BASIS,
+WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+See the License for the specific language governing permissions and
+limitations under the License.
+
+Author: Edoardo Pasca
+"""
+
+import cython
+import numpy as np
+cimport numpy as np
diff --git a/Wrappers/Python/src/fista_module.cpp b/Wrappers/Python/src/fista_module.cpp
index 3876cad..cef3ecc 100644
--- a/Wrappers/Python/src/fista_module.cpp
+++ b/Wrappers/Python/src/fista_module.cpp
@@ -1028,13 +1028,13 @@ bp::list TGV_PD(np::ndarray input, double d_lambda, double d_alpha1, double d_al
return result;
}
-BOOST_PYTHON_MODULE(cpu_regularizers)
+BOOST_PYTHON_MODULE(cpu_regularizers_boost)
{
np::initialize();
//To specify that this module is a package
bp::object package = bp::scope();
- package.attr("__path__") = "cpu_regularizers";
+ package.attr("__path__") = "cpu_regularizers_boost";
np::dtype dt1 = np::dtype::get_builtin<uint8_t>();
np::dtype dt2 = np::dtype::get_builtin<uint16_t>();
diff --git a/Wrappers/Python/test/test_cpu_regularizers.py b/Wrappers/Python/test/test_cpu_regularizers.py
index 6c97875..9713baa 100644
--- a/Wrappers/Python/test/test_cpu_regularizers.py
+++ b/Wrappers/Python/test/test_cpu_regularizers.py
@@ -11,8 +11,9 @@ import numpy as np
import os
from enum import Enum
import timeit
-from ccpi.filters.cpu_regularizers import SplitBregman_TV , FGP_TV , LLT_model, \
- PatchBased_Regul , TGV_PD
+from ccpi.filters.cpu_regularizers_boost import SplitBregman_TV , FGP_TV ,\
+ LLT_model, PatchBased_Regul ,\
+ TGV_PD
###############################################################################
#https://stackoverflow.com/questions/13875989/comparing-image-in-url-to-image-in-filesystem-in-python/13884956#13884956
generated by cgit v1.2.3 (git 2.25.1) at 2024-11-27 08:46:24 +0000